RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 POTEB3A0JP26 581 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 CFAP69A5D8W1 941 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 POTECB2RU33 542 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 DCTN3O75935 186 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 CCDC15Q0P6D6 951 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 EPHA7Q15375 998 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 DPY19L2P1Q6NXN4 242 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 POTEBQ6S5H4 581 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 PPP1R21Q6ZMI0 780 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 LRRC74BQ6ZQY2 392 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 C4orf50Q6ZRC1 276 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 MCUR1Q96AQ8 359 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 RHBDL2Q9NX52 303 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 GALNT8Q9NY28 637 aa13.54□□□□□ -0.24
SMG8-202ENST00000543872 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 DLATP10515 647 aaKnown RBP13.53□□□□□ -0.24
SMG8-202ENST00000543872 HP1BP3Q5SSJ5 553 aaPredicted RBP13.53□□□□□ -0.24
SMG8-202ENST00000543872 BTBD6Q96KE9 485 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 NPHS2Q9NP85 383 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 DMAP1Q9NPF5 467 aaPredicted RBP13.53□□□□□ -0.24
SMG8-202ENST00000543872 AAASQ9NRG9 546 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 DNAJC12Q9UKB3 198 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 MAP3K7O43318 606 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 SPOPO43791 374 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 TBX10O75333 385 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 TTC4O95801 387 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 COMTP21964 271 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 PTPN4P29074 926 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMG8-202ENST00000543872 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
SMG8-202ENST00000543872 KRT17Q04695 432 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 CAVIN4Q5BKX8 364 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 ACSBG2Q5FVE4 666 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 MEX3CQ5U5Q3 659 aaKnown RBP13.53□□□□□ -0.24
SMG8-202ENST00000543872 SUSD4Q5VX71 490 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 C4orf33Q8N1A6 199 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 IFT43Q96FT9 208 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 PCYOX1Q9UHG3 505 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
SMG8-202ENST00000543872 POC1B-GALNT4F8VUJ3 575 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 MAFGO15525 162 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 ATMINO43313 823 aaPredicted RBP13.52□□□□□ -0.24
SMG8-202ENST00000543872 LMNAP02545 664 aaKnown RBP13.52□□□□□ -0.24
SMG8-202ENST00000543872 CHRNB2P17787 502 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 CCNFP41002 786 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 CD151P48509 253 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 MARSP56192 900 aaKnown RBP13.52□□□□□ -0.24
SMG8-202ENST00000543872 ACVR2BQ13705 512 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 UBE2SQ16763 222 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 CNPY1Q3B7I2 92 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 CCDC125Q86Z20 511 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 SIX2Q9NPC8 291 aa13.52□□□□□ -0.24
SMG8-202ENST00000543872 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 MEIS1O00470 390 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 PRDX5P30044 214 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 SOX5P35711 763 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 NEK3P51956 506 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 ANKRD35Q8N283 1001 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 ATG4AQ8WYN0 398 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 MIPEPQ99797 713 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 SLX1AQ9BQ83 275 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 CADM1Q9BY67 442 aaKnown RBP13.52□□□□□ -0.25
SMG8-202ENST00000543872 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
SMG8-202ENST00000543872 PCDHA3Q9Y5H8 950 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 ALDH1B1P30837 517 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 OVGP1Q12889 678 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 MPP3Q13368 585 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 TMEM119Q4V9L6 283 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 WASF2Q9Y6W5 498 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.25
SMG8-202ENST00000543872 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 GYG2O15488 501 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 PFDN1O60925 122 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ZNF189O75820 626 aaPredicted RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 FTLP02792 175 aaPredicted RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 KRT15P19012 456 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ADCY8P40145 1251 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 ITGA8P53708 1063 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 SLC34A1Q06495 639 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 GIT2Q14161 759 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 NLRP9Q7RTR0 991 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 FRMD5Q7Z6J6 570 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
SMG8-202ENST00000543872 FAM118BQ9BPY3 351 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMG8-202ENST00000543872 CCDC88AQ3V6T2 1871 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 CLDN3O15551 220 aa13.51□□□□□ -0.25
SMG8-202ENST00000543872 BAG2O95816 211 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms