RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 PDZD7Q9H5P4 517 aa15.52■□□□□ 0.08
SUDS3-203ENST00000541591 SNTG2Q9NY99 539 aa15.52■□□□□ 0.08
SUDS3-203ENST00000541591 LRWD1Q9UFC0 647 aa15.52■□□□□ 0.08
SUDS3-203ENST00000541591 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 TMEM221A6NGB7 291 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 CASTOR2A6NHX0 329 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 M0R296 226 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 ASGR2P07307 311 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 RPL17P18621 184 aaKnown RBP15.51■□□□□ 0.07
SUDS3-203ENST00000541591 ZXDAP98168 799 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 DSC1Q08554 894 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 NCBP1Q09161 790 aaKnown RBP15.51■□□□□ 0.07
SUDS3-203ENST00000541591 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
SUDS3-203ENST00000541591 RABEP1Q15276 862 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 TPRNQ4KMQ1 711 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 CDCA2Q69YH5 1023 aaPredicted RBP15.51■□□□□ 0.07
SUDS3-203ENST00000541591 CES5AQ6NT32 575 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 CABP7Q86V35 215 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 CNNM3Q8NE01 707 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 GSTCDQ8NEC7 633 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 MCPH1Q8NEM0 835 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 DEPTORQ8TB45 409 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 EDAQ92838 391 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 CCDC51Q96ER9 411 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 PLIN2Q99541 437 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 ADAM7Q9H2U9 754 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 PRMT7Q9NVM4 692 aaPredicted RBP15.51■□□□□ 0.07
SUDS3-203ENST00000541591 KANSL3Q9P2N6 904 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 GDAQ9Y2T3 454 aa15.51■□□□□ 0.07
SUDS3-203ENST00000541591 ZDBF2Q9HCK1 2354 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 A0A1B0GUA9 196 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 PDGFBP01127 241 aaPredicted RBP15.5■□□□□ 0.07
SUDS3-203ENST00000541591 SOD2P04179 222 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 URODP06132 367 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 XRCC6P12956 609 aaKnown RBP eCLIP15.5■□□□□ 0.07
SUDS3-203ENST00000541591 HOXB8P17481 243 aaPredicted RBP15.5■□□□□ 0.07
SUDS3-203ENST00000541591 CYP11B2P19099 503 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 GJB2P29033 226 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
SUDS3-203ENST00000541591 CLCN4P51793 760 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 POU5F1BQ06416 359 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 RAD51AP2Q09MP3 1159 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 PRPF4BQ13523 1007 aaKnown RBP15.5■□□□□ 0.07
SUDS3-203ENST00000541591 HAUS3Q68CZ6 603 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 TRIM67Q6ZTA4 783 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 KCNK18Q7Z418 384 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 TMX3Q96JJ7 454 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 FBXL18Q96ME1 805 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 RPS6KC1Q96S38 1066 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 NFKBIZQ9BYH8 718 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 GPR62Q9BZJ7 368 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 CCDC113Q9H0I3 377 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 MAN1C1Q9NR34 630 aa15.5■□□□□ 0.07
SUDS3-203ENST00000541591 MRPL17Q9NRX2 175 aaKnown RBP15.5■□□□□ 0.07
SUDS3-203ENST00000541591 TEX28O15482 410 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 LILRB3O75022 631 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 RECQL4O94761 1208 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 IGFBP6P24592 240 aaPredicted RBP15.49■□□□□ 0.07
SUDS3-203ENST00000541591 U2AF2P26368 475 aaKnown RBP eCLIP15.49■□□□□ 0.076e-9■■■□□ 16.1
SUDS3-203ENST00000541591 GLUD2P49448 558 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 PTPN21Q16825 1174 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 GLRA4Q5JXX5 417 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 PRSS55Q6UWB4 352 aaPredicted RBP15.49■□□□□ 0.07
SUDS3-203ENST00000541591 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 PALB2Q86YC2 1186 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 EMILIN2Q9BXX0 1053 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 FZD8Q9H461 694 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 UBN1Q9NPG3 1134 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 DZANK1Q9NVP4 752 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 GIT1Q9Y2X7 761 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 IRAK3Q9Y616 596 aa15.49■□□□□ 0.07
SUDS3-203ENST00000541591 PTGESO14684 152 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 N4BP3O15049 544 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 INPPL1O15357 1258 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 ST18O60284 1047 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 RFPL2O75678 378 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 TRAPPC10P48553 1259 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 ITIH3Q06033 890 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 GRIK3Q13003 919 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 ORC2Q13416 577 aaPredicted RBP15.48■□□□□ 0.07
SUDS3-203ENST00000541591 PCBP1Q15365 356 aaKnown RBP eCLIP15.48■□□□□ 0.07
SUDS3-203ENST00000541591 MAPK6Q16659 721 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 NT5DC1Q5TFE4 455 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 KIAA1841Q6NSI8 718 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 FUT10Q6P4F1 479 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 CEP120Q8N960 986 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 KREMEN2Q8NCW0 462 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 ST13P5Q8NFI4 369 aaPredicted RBP15.48■□□□□ 0.07
SUDS3-203ENST00000541591 PBXIP1Q96AQ6 731 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 MMTAG2Q9BU76 263 aaKnown RBP15.48■□□□□ 0.07
SUDS3-203ENST00000541591 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.48■□□□□ 0.07
SUDS3-203ENST00000541591 MIA3Q5JRA6 1907 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 COL4A3Q01955 1670 aa15.48■□□□□ 0.07
SUDS3-203ENST00000541591 CCDC169A6NNP5 214 aa15.47■□□□□ 0.07
SUDS3-203ENST00000541591 SFI1A8K8P3 1242 aa15.47■□□□□ 0.07
SUDS3-203ENST00000541591 HIP1RO75146 1068 aa15.47■□□□□ 0.07
SUDS3-203ENST00000541591 KIF4AO95239 1232 aa15.47■□□□□ 0.07
SUDS3-203ENST00000541591 HARSP12081 509 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms