RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
COPA-205ENST00000541366 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 SHDQ96IW2 340 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 APOL6Q9BWW8 343 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 ZDHHC7Q9NXF8 308 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 RALYQ9UKM9 306 aaKnown RBP13.21□□□□□ -0.29
COPA-205ENST00000541366 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
COPA-205ENST00000541366 IPPQ9Y573 584 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 PCDHGA2Q9Y5H1 932 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 TDRD15B5MCY1 1934 aaKnown RBP13.21□□□□□ -0.3
COPA-205ENST00000541366 ZMYND10O75800 440 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 GNA11P29992 359 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 LPAL2Q16609 132 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 FUT10Q6P4F1 479 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
COPA-205ENST00000541366 ITFG1Q8TB96 612 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 CPB2Q96IY4 423 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 VPS54Q9P1Q0 977 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
COPA-205ENST00000541366 CNOT1A5YKK6 2376 aaKnown RBP13.2□□□□□ -0.3
COPA-205ENST00000541366 F5P12259 2224 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 NOTCH4Q99466 2003 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 EML1O00423 815 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 CCL16O15467 120 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 LILRB5O75023 590 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 TARSP26639 723 aaKnown RBP13.19□□□□□ -0.3
COPA-205ENST00000541366 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 RDM1Q8NG50 284 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
COPA-205ENST00000541366 NELL1Q92832 810 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 FGF13Q92913 245 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 MBOAT7Q96N66 472 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
COPA-205ENST00000541366 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
COPA-205ENST00000541366 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
COPA-205ENST00000541366 TSPAN1O60635 241 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 ADRB1P08588 477 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 SDHBP21912 280 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 AKAP5P24588 427 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 USP11P51784 963 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 LMNB2Q03252 620 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 PRKCQQ04759 706 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 RTP2Q5QGT7 225 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 TPRG1Q6ZUI0 275 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 CDR2LQ86X02 465 aaPredicted RBP13.18□□□□□ -0.3
COPA-205ENST00000541366 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
COPA-205ENST00000541366 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 GSTCDQ8NEC7 633 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 HASPINQ8TF76 798 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 COLEC11Q9BWP8 271 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 NXF3Q9H4D5 531 aaKnown RBP13.18□□□□□ -0.3
COPA-205ENST00000541366 HCFC1R1Q9NWW0 138 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 FNIP2Q9P278 1114 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 FBXW11Q9UKB1 542 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 POLIQ9UNA4 740 aa13.18□□□□□ -0.3
COPA-205ENST00000541366 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.18□□□□□ -0.3
COPA-205ENST00000541366 SHISA7A6NL88 538 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 ZBTB39O15060 712 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 ADAM12O43184 909 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 PSMC5P62195 406 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 MTAPQ13126 283 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 FZD5Q13467 585 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 Q4G0T1 1027 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
COPA-205ENST00000541366 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
COPA-205ENST00000541366 CLDN23Q96B33 292 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 OSBPL6Q9BZF3 934 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 PLA2G2FQ9BZM2 168 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
COPA-205ENST00000541366 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 HEBP1Q9NRV9 189 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
COPA-205ENST00000541366 KLK14Q9P0G3 267 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 ADAM28Q9UKQ2 775 aa13.17□□□□□ -0.3
COPA-205ENST00000541366 ZFP37Q9Y6Q3 630 aaPredicted RBP13.17□□□□□ -0.3
COPA-205ENST00000541366 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 ERLIN2O94905 339 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 C8AP07357 584 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 NTRK3Q16288 839 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
COPA-205ENST00000541366 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms