RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 MIF4GDA9UHW6 222 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 MAPK13O15264 365 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 RTN2O75298 545 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 RARAP10276 462 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 CHN1P15882 459 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 CHRNA3P32297 505 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 PLTPP55058 493 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 GPC5P78333 572 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 PRPF4BQ13523 1007 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 PPP2R5EQ16537 467 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 INTS8Q75QN2 995 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 SLC47A2Q86VL8 602 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 NEK9Q8TD19 979 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 SHC3Q92529 594 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 A1CFQ9NQ94 594 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 HSPBP1Q9NZL4 362 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 CNOT7Q9UIV1 285 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 DBR1Q9UK59 544 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 H0YIN7 160 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 K7ENM7 598 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 MMEP08473 750 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 PTGER2P43116 358 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 GTF2A1P52655 376 aaPredicted RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 MRPS9P82933 396 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 CABS1Q96KC9 395 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 POP1Q99575 1024 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 TEKT3Q9BXF9 490 aa10.27□□□□□ -0.77
CNOT4-212ENST00000541284 HERC5Q9UII4 1024 aaKnown RBP10.27□□□□□ -0.77
CNOT4-212ENST00000541284 RIPK2O43353 540 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 LYPLA2O95372 231 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 IVDP26440 423 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 NCKAP1LP55160 1127 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 GSCP56915 257 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 SLC39A4Q6P5W5 647 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 LDHDQ86WU2 507 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 SLCO2A1Q92959 643 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 NAP1L3Q99457 506 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 AZI2Q9H6S1 392 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 CNOT10Q9H9A5 744 aaKnown RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 COQ4Q9Y3A0 265 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 PLXNB2O15031 1838 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 ASTN2O75129 1339 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 NFKBIEO00221 500 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 PPIP5K2O43314 1243 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 GZMAP12544 262 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 PLS3P13797 630 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 COILP38432 576 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 SCTRP47872 440 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 AUHQ13825 339 aaKnown RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 SLC13A5Q86YT5 568 aaPredicted RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 AGBL3Q8NEM8 1001 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 KCNH7Q9NS40 1196 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 UBIAD1Q9Y5Z9 338 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 ARHGEF35A5YM69 484 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 GGPS1O95749 300 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 TGFB2P61812 414 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 CCDC137Q6PK04 289 aaKnown RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 FMNL3Q8IVF7 1028 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 YY1AP1Q9H869 796 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 AGO4Q9HCK5 861 aaKnown RBP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 GPRC5CQ9NQ84 441 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.26□□□□□ -0.77
CNOT4-212ENST00000541284 CTTNBP2NLQ9P2B4 639 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 NEU2Q9Y3R4 380 aa10.26□□□□□ -0.77
CNOT4-212ENST00000541284 CYP26A1O43174 497 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 CCDC172P0C7W6 258 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 HSPA6P17066 643 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 FGFR4P22455 802 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 XRCC4Q13426 336 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 RNF187Q5TA31 235 aaPredicted RBP10.25□□□□□ -0.77
CNOT4-212ENST00000541284 MSL1Q68DK7 614 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 MFSD5Q6N075 450 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 STXBP4Q6ZWJ1 553 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 MAEAQ7L5Y9 396 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 FUKQ8N0W3 1084 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 SUPT20HQ8NEM7 779 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 ELMO3Q96BJ8 720 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 SH2D3AQ9BRG2 576 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 WNT8AQ9H1J5 351 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 CD248Q9HCU0 757 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 ZNF112Q9UJU3 913 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 PDCD11Q14690 1871 aaKnown RBP10.25□□□□□ -0.77
CNOT4-212ENST00000541284 DDX39AO00148 427 aaKnown RBP10.25□□□□□ -0.77
CNOT4-212ENST00000541284 NFIBO00712 420 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 CALCAP01258 141 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 KCNJ1P48048 391 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 RASA3Q14644 834 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 MESDQ14696 234 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 FAM151AQ8WW52 585 aa10.25□□□□□ -0.77
CNOT4-212ENST00000541284 ZKSCAN4Q969J2 545 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms