RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KLK14Q9P0G3 267 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 KANSL3Q9P2N6 904 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 TNFSF13BQ9Y275 285 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 GIT1Q9Y2X7 761 aa10.14□□□□□ -0.79
SNHG1-215ENST00000540904 COL6A3P12111 3177 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 K7ENM7 598 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 POLR2DO15514 142 aaKnown RBP10.13□□□□□ -0.79
SNHG1-215ENST00000540904 RECQL4O94761 1208 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 DDHD2O94830 711 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 IDEP14735 1019 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 PPM1AP35813 382 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 SCNN1GP51170 649 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 NCKAP1LP55160 1127 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 NUCB2P80303 420 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 KRT17Q04695 432 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 CAMK1Q14012 370 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 E2F4Q16254 413 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 DCAF4L1Q3SXM0 396 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 ZNF568Q3ZCX4 644 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 TPRNQ4KMQ1 711 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 TIGD5Q53EQ6 642 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 TCEAL5Q5H9L2 206 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 RESP18Q5W5W9 173 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 ZBTB33Q86T24 672 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 SFR1Q86XK3 245 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 IQUBQ8NA54 791 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 MICAL1Q8TDZ2 1067 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 STAMQ92783 540 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 BICD1Q96G01 975 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 FAM193BQ96PV7 902 aaPredicted RBP10.13□□□□□ -0.79
SNHG1-215ENST00000540904 RPS6KC1Q96S38 1066 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 TCHPQ9BT92 498 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 MIOSQ9NXC5 875 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 SNTG2Q9NY99 539 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 ANKFY1Q9P2R3 1169 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 DNAJB4Q9UDY4 337 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 PUF60Q9UHX1 559 aaKnown RBP10.13□□□□□ -0.79
SNHG1-215ENST00000540904 GDAQ9Y2T3 454 aa10.13□□□□□ -0.79
SNHG1-215ENST00000540904 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 B4GALT3O60512 393 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 GALTP07902 379 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 HARSP12081 509 aaKnown RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 NMT1P30419 496 aaKnown RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 IRS1P35568 1242 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 MATR3P43243 847 aaKnown RBP eCLIP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 SLC11A1P49279 550 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 OSTNP61366 133 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 PLCB3Q01970 1234 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 UBE3AQ05086 875 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 ZC2HC1CQ53FD0 456 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 MPZL3Q6UWV2 235 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 SLC39A11Q8N1S5 342 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 DNAJC19Q96DA6 116 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 ZBTB45Q96K62 511 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 SCAND2PQ9GZW5 306 aaPredicted RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 CDT1Q9H211 546 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 TNMDQ9H2S6 317 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 CUEDC2Q9H467 287 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 NSUN3Q9H649 340 aaKnown RBP10.12□□□□□ -0.79
SNHG1-215ENST00000540904 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 PTPRHQ9HD43 1115 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 TLR9Q9NR96 1032 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 TBC1D7Q9P0N9 293 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 KCNH3Q9ULD8 1083 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 TBX20Q9UMR3 447 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 PCDHGC5Q9Y5F6 944 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 MYO9BQ13459 2157 aa10.12□□□□□ -0.79
SNHG1-215ENST00000540904 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 FNDC1Q4ZHG4 1894 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 HNRNPDLO14979 420 aaKnown RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 INPPL1O15357 1258 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 CLDN3O15551 220 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 TOM1L1O75674 476 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ALDH2P05091 517 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 MCF2P10911 925 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 GAP43P17677 238 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 SCP2P22307 547 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 PROZP22891 400 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ANP32AP39687 249 aaKnown RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 OR1G1P47890 313 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 LIG4P49917 911 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ERVFC1P60507 584 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 AMPD3Q01432 767 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.791e-323■■■■■ 34.6
SNHG1-215ENST00000540904 HERC4Q5GLZ8 1057 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ZPBP2Q6X784 338 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 EP400NLQ6ZTU2 488 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 TMEM173Q86WV6 379 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 COLGALT2Q8IYK4 626 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 CEP120Q8N960 986 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 GSTCDQ8NEC7 633 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 MRPS27Q92552 414 aaKnown RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 TMEM169Q96HH4 297 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 IGSF21Q96ID5 467 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 FIZ1Q96SL8 496 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 TCF25Q9BQ70 676 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms