RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 MIA3Q5JRA6 1907 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 F8W810 466 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 AXIN1O15169 862 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 POU2F2P09086 479 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 RAB27AP51159 221 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 NOVA1P51513 510 aaKnown RBP11.68□□□□□ -0.54
SSPN-207ENST00000540266 PDE1AP54750 535 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 DSC1Q08554 894 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 IMMTQ16891 758 aaKnown RBP11.68□□□□□ -0.54
SSPN-207ENST00000540266 CKAP2LQ8IYA6 745 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 SPEM1Q8N4L4 309 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 URGCPQ8TCY9 931 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 CCDC97Q96F63 343 aaPredicted RBP11.68□□□□□ -0.54
SSPN-207ENST00000540266 B3GALT6Q96L58 329 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 GCOM2Q9BZD3 368 aaPredicted RBP11.68□□□□□ -0.54
SSPN-207ENST00000540266 KCNH3Q9ULD8 1083 aa11.68□□□□□ -0.54
SSPN-207ENST00000540266 PRG3Q9Y2Y8 225 aaPredicted RBP11.68□□□□□ -0.54
SSPN-207ENST00000540266 F5P12259 2224 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
SSPN-207ENST00000540266 CYSRT1A8MQ03 144 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 DDX39AO00148 427 aaKnown RBP11.67□□□□□ -0.54
SSPN-207ENST00000540266 EPN2O95208 641 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 POMCP01189 267 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 SDSP20132 328 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 HOXA9P31269 272 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 KIF5BP33176 963 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 CDC42EP1Q00587 391 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 ZNF252P-AS1Q0IIN9 211 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 DRP2Q13474 957 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 TMCO4Q5TGY1 634 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 TANGO2Q6ICL3 276 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 TRMT1LQ7Z2T5 733 aaKnown RBP11.67□□□□□ -0.54
SSPN-207ENST00000540266 NLRP7Q8WX94 980 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 PGBD4Q96DM1 585 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 FAM193BQ96PV7 902 aaPredicted RBP11.67□□□□□ -0.54
SSPN-207ENST00000540266 DSCC1Q9BVC3 393 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 GPR62Q9BZJ7 368 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 TRPV5Q9NQA5 729 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 GDE1Q9NZC3 331 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 FBXW11Q9UKB1 542 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 GPSM3Q9Y4H4 160 aa11.67□□□□□ -0.54
SSPN-207ENST00000540266 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
SSPN-207ENST00000540266 HOXC13P31276 330 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
SSPN-207ENST00000540266 AMHR2Q16671 573 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 NIPA1Q7RTP0 329 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 MAP4K3Q8IVH8 894 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 SRBD1Q8N5C6 995 aaKnown RBP11.66□□□□□ -0.54
SSPN-207ENST00000540266 FAM3CQ92520 227 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 ELSPBP1Q96BH3 223 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 RSAD1Q9HA92 442 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 C2orf42Q9NWW7 574 aa11.66□□□□□ -0.54
SSPN-207ENST00000540266 DNMT3BQ9UBC3 853 aaKnown RBP11.66□□□□□ -0.54
SSPN-207ENST00000540266 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
SSPN-207ENST00000540266 PIN4Q9Y237 131 aaKnown RBP11.66□□□□□ -0.54
SSPN-207ENST00000540266 CNTNAP2Q9UHC6 1331 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 FAM86B1E9PN63 330 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 IPO5O00410 1097 aaKnown RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 ZNF862O60290 1169 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 FAM86B2P0C5J1 330 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 CEACAM1P13688 526 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.54
SSPN-207ENST00000540266 FCARP24071 287 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 PTGDRQ13258 359 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 MCM6Q14566 821 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 TARBP2Q15633 366 aaKnown RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 USP41Q3LFD5 358 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 WDR44Q5JSH3 913 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 RNF43Q68DV7 783 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 HEATR6Q6AI08 1181 aaKnown RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 ZNF746Q6NUN9 644 aaPredicted RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 CEP68Q76N32 757 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 PDZD3Q86UT5 571 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 WDR5BQ86VZ2 330 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 GLYCTKQ8IVS8 523 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 IGDCC4Q8TDY8 1250 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 FAM167AQ96KS9 214 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 SCLT1Q96NL6 688 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 BBC3Q96PG8 261 aaPredicted RBP11.65□□□□□ -0.54
SSPN-207ENST00000540266 CEP89Q96ST8 783 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 CLSTN3Q9BQT9 956 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 LZTS2Q9BRK4 669 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 SMOC1Q9H4F8 434 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 HCFC1R1Q9NWW0 138 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 NEUROG3Q9Y4Z2 214 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 PCDHGA5Q9Y5G8 931 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 PCDHA10Q9Y5I2 948 aa11.65□□□□□ -0.54
SSPN-207ENST00000540266 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
SSPN-207ENST00000540266 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
SSPN-207ENST00000540266 A0A087WZ62 844 aa11.64□□□□□ -0.55
SSPN-207ENST00000540266 IGKV6-21A0A0C4DH24 114 aa11.64□□□□□ -0.55
SSPN-207ENST00000540266 NRG2O14511 850 aaPredicted RBP11.64□□□□□ -0.55
SSPN-207ENST00000540266 CCL16O15467 120 aa11.64□□□□□ -0.55
SSPN-207ENST00000540266 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
SSPN-207ENST00000540266 OR1G1P47890 313 aa11.64□□□□□ -0.55
SSPN-207ENST00000540266 MLLT6P55198 1093 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms