RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 MEIS3P2A8K0S8 358 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 KLRC4O43908 158 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 NR1I2O75469 434 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ARHGEF15O94989 841 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 SLC34A2O95436 690 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 NPTXRO95502 500 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 EOMESO95936 686 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 PIGRP01833 764 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 CA3P07451 260 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 LINC00271P0C7V0 271 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 MYBP10242 640 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 FGFR1P11362 822 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 SKIP12755 728 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 IBSPP21815 317 aaPredicted RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 PROZP22891 400 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ABCD1P33897 745 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 GATMP50440 423 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 UBE2HP62256 183 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 NCBP1Q09161 790 aaKnown RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 DPYDQ12882 1025 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 STRN3Q13033 797 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ZC2HC1CQ53FD0 456 aaPredicted RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 HERC4Q5GLZ8 1057 aaPredicted RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 CLLU1OSQ5K130 101 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ATF7IP2Q5U623 682 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ZPBP2Q6X784 338 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF720Q7Z2F6 126 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 MRPL10Q7Z7H8 261 aaKnown RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 CNNM3Q8NE01 707 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 LPPQ93052 612 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 TIFAQ96CG3 184 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 HVCN1Q96D96 273 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 TIGD1Q96MW7 591 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 YME1L1Q96TA2 773 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ACO2Q99798 780 aaKnown RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 ZBED2Q9BTP6 218 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 TARS2Q9BW92 718 aaKnown RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 CDT1Q9H211 546 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 NKX2-4Q9H2Z4 354 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 NXF3Q9H4D5 531 aaKnown RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 MRPL44Q9H9J2 332 aaKnown RBP7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 PTPRHQ9HD43 1115 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 TBC1D7Q9P0N9 293 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 MSRAQ9UJ68 235 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 LRFN2Q9ULH4 789 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 TNFSF13BQ9Y275 285 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 IPPQ9Y573 584 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 INSL6Q9Y581 213 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 PCDHB7Q9Y5E2 793 aa7.66□□□□□ -1.18
LPCAT3-209ENST00000540060 PVALEFA0A1B0GWK0 134 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 LINC01553A4QN01 128 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 HNRNPDLO14979 420 aaKnown RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 INPPL1O15357 1258 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 EIF3DO15371 548 aaKnown RBP eCLIP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 HOXA2O43364 376 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 PRPF40AO75400 957 aaKnown RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TOM1L1O75674 476 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 UBE4BO95155 1302 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 GCNT3O95395 438 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TSC2P49815 1807 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TAP1Q03518 808 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 KCNA1Q09470 495 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 PNOCQ13519 176 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 ALCAMQ13740 583 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 POSTNQ15063 836 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TMEM132AQ24JP5 1023 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 DCAF4L1Q3SXM0 396 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 ZNF568Q3ZCX4 644 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 FAM26FQ5R3K3 315 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 L1TD1Q5T7N2 865 aaKnown RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 PPP2R2DQ66LE6 453 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 KANK3Q6NY19 840 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 SLC39A4Q6P5W5 647 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 MPZL3Q6UWV2 235 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 AGMOQ6ZNB7 445 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 EPM2AIP1Q7L775 607 aaPredicted RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 SPRED2Q7Z698 418 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 CMTR2Q8IYT2 770 aaKnown RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 RNF169Q8NCN4 708 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 GLIS3Q8NEA6 775 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 HELQQ8TDG4 1101 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 RSPH1Q8WYR4 309 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 HPS3Q969F9 1004 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 CASD1Q96PB1 797 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 GBP4Q96PP9 640 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 ADPGKQ9BRR6 497 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TRIM6Q9C030 488 aaPredicted RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 HAPLN2Q9GZV7 340 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TMEM117Q9H0C3 514 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 TTYH1Q9H313 450 aaPredicted RBP7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 ANKFY1Q9P2R3 1169 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 HES2Q9Y543 173 aa7.65□□□□□ -1.18
LPCAT3-209ENST00000540060 COL6A3P12111 3177 aa7.65□□□□□ -1.19
LPCAT3-209ENST00000540060 TBKBP1A7MCY6 615 aa7.64□□□□□ -1.19
LPCAT3-209ENST00000540060 TISP43B9A030 160 aa7.64□□□□□ -1.19
LPCAT3-209ENST00000540060 FAM189A1O60320 539 aa7.64□□□□□ -1.19
LPCAT3-209ENST00000540060 KINO60870 393 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms