RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RPL13P26373 211 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CYP2J2P51589 502 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NFX1Q12986 1120 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 MYBPC2Q14324 1141 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HSP90AA4PQ58FG1 418 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SLFN12LQ6IEE8 588 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 MPZL3Q6UWV2 235 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ZBTB33Q86T24 672 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 IRF2BP1Q8IU81 584 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 USP38Q8NB14 1042 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 BADQ92934 168 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TCHPQ9BT92 498 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ERVK-5Q9HDB9 667 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HSPBP1Q9NZL4 362 aa20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PIN4Q9Y237 131 aaKnown RBP20.67■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GOLGA6L19H0YKK7 550 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CETN3O15182 167 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GPR182O15218 404 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 TIMP1P01033 207 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 RAG1P15918 1043 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 AXLP30530 894 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CASP4P49662 377 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 MCL1Q07820 350 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NCBP1Q09161 790 aaKnown RBP20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CDT1Q9H211 546 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 THAP9Q9H5L6 903 aa20.66■□□□□ 0.9
TNFRSF1A-213ENST00000540022 N4BP3O15049 544 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 EXOC3O60645 756 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NBNO60934 754 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 AKAP3O75969 853 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 HARSP12081 509 aaKnown RBP20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ZNF18P17022 549 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 MATR3P43243 847 aaKnown RBP eCLIP20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 PAK2Q13177 524 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 ZNF568Q3ZCX4 644 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CDKAL1Q5VV42 579 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CEP135Q66GS9 1140 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NOTUMQ6P988 496 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 XXYLT1Q8NBI6 393 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NOC3LQ8WTT2 800 aaKnown RBP20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 VWCEQ96DN2 955 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 SAAL1Q96ER3 474 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 CEP63Q96MT8 703 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 MSTO1Q9BUK6 570 aa20.65■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GOLGA8IPA6NC78 632 aa20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 GOLGA8JA6NMD2 632 aa20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 FGFR1OPO95684 399 aaKnown RBP20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 NOLC1Q14978 699 aaKnown RBP eCLIP20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 LRIT3Q3SXY7 679 aa20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 FILIP1Q7Z7B0 1213 aa20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 LRCH3Q96II8 777 aa20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 AGO2Q9UKV8 859 aaKnown RBP20.64■□□□□ 0.9
TNFRSF1A-213ENST00000540022 FSD2A1L4K1 749 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 ATP1A3P13637 1013 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 GSE1Q14687 1217 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 ZBTB41Q5SVQ8 909 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 RDH13Q8NBN7 331 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 FBXL18Q96ME1 805 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 TMX1Q9H3N1 280 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 KIAA0391O15091 583 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 FAM189A1O60320 539 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 MCF2P10911 925 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CSF2RAP15509 400 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 SEZ6Q53EL9 994 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 UBXN11Q5T124 520 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 MFSD5Q6N075 450 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 SLC27A1Q6PCB7 646 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CBWD2Q8IUF1 395 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 GPD1LQ8N335 351 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CEP120Q8N960 986 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CNOT6LQ96LI5 555 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 ADPGKQ9BRR6 497 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 FAM213AQ9BRX8 229 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 EIF2AQ9BY44 585 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 IFIH1Q9BYX4 1025 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CHST12Q9NRB3 414 aa20.63■□□□□ 0.89
TNFRSF1A-213ENST00000540022 GOLGA6L3A6NEY3 463 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 OGTO15294 1046 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 SLC16A3O15427 465 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 EXTL3O43909 919 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 MGEA5O60502 916 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 NPTXRO95502 500 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 PSMC2P35998 433 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 ACOT2P49753 483 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 TPM4P67936 248 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 DSC3Q14574 896 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 TCTN1Q2MV58 587 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CRELD2Q6UXH1 353 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 THNSL1Q8IYQ7 743 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 CCDC51Q96ER9 411 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 MKNK1Q9BUB5 465 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 FRMD4BQ9Y2L6 1034 aa20.62■□□□□ 0.89
TNFRSF1A-213ENST00000540022 KCNJ18B7U540 433 aa20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 PARNO95453 639 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 LDHAP00338 332 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 ADRB2P07550 413 aa20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 TNFSF9P41273 254 aa20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 EPHB4P54760 987 aa20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 KCNJ12Q14500 433 aa20.61■□□□□ 0.89
TNFRSF1A-213ENST00000540022 PLEKHG4Q58EX7 1191 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms