RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 RILPL1Q5EBL4 403 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 C12orf76Q8N812 135 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 IFT74Q96LB3 600 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CCDC113Q9H0I3 377 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PDZD7Q9H5P4 517 aa21.06■□□□□ 0.96
TNFRSF1A-212ENST00000539372 C2CD2LO14523 706 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 N4BP3O15049 544 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 EDN1P05305 212 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PPP2R5AQ15172 486 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ZRSR1Q15695 479 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 KANK3Q6NY19 840 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 TAS1R1Q7RTX1 841 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 GSTCDQ8NEC7 633 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 KIFAP3Q92845 792 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 MMTAG2Q9BU76 263 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 DNM3Q9UQ16 869 aa21.05■□□□□ 0.96
TNFRSF1A-212ENST00000539372 WEE2P0C1S8 567 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ATP2C1P98194 919 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 HERC4Q5GLZ8 1057 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 RARS2Q5T160 578 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 KCNK18Q7Z418 384 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 SLC22A17Q8WUG5 538 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 RABGGTAQ92696 567 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 KLHL5Q96PQ7 755 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 RPS6KC1Q96S38 1066 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ADAM7Q9H2U9 754 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 MRPL17Q9NRX2 175 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 SNTG2Q9NY99 539 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CACNG4Q9UBN1 327 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 STK39Q9UEW8 545 aa21.04■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PRR33A8MZF0 331 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ACKR2O00590 384 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 NR1I2O75469 434 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 SOD2P04179 222 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CNPP09543 421 aaKnown RBP21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 KLRC2P26717 231 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 GRIK3Q13003 919 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 EEF1DP3Q658K8 133 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 LARP1BQ659C4 914 aaKnown RBP21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CES5AQ6NT32 575 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 RUSC1Q9BVN2 902 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 HERC2P3Q9BVR0 1158 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 EMILIN2Q9BXX0 1053 aa21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF1A-212ENST00000539372 VWA3AA6NCI4 1184 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CCDC169A6NNP5 214 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 LILRB3O75022 631 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 HIP1RO75146 1068 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 URODP06132 367 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ITIH3Q06033 890 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CABP7Q86V35 215 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 FEZF2Q8TBJ5 459 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 PLIN2Q99541 437 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 ADPGKQ9BRR6 497 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 COLEC11Q9BWP8 271 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 CXCL16Q9H2A7 254 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 TSHZ2Q9NRE2 1034 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 DZANK1Q9NVP4 752 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 HCN4Q9Y3Q4 1203 aa21.02■□□□□ 0.96
TNFRSF1A-212ENST00000539372 RECQL4O94761 1208 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 EFNA5P52803 228 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 PEX3P56589 373 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 NT5DC1Q5TFE4 455 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 RINT1Q6NUQ1 792 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 PPFIBP1Q86W92 1011 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 DAW1Q8N136 415 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 B3GALT6Q96L58 329 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 POMKQ9H5K3 350 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 GDAQ9Y2T3 454 aa21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 TDRD15B5MCY1 1934 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-212ENST00000539372 ZMYM2Q9UBW7 1377 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 SPDYE4A6NLX3 237 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 EFEMP2O95967 443 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 NPTX2P47972 431 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 GLUD2P49448 558 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 CLCN4P51793 760 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 ATF7IP2Q5U623 682 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 TMC5Q6UXY8 1006 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 C1orf186Q6ZWK4 172 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 RNF168Q8IYW5 571 aaPredicted RBP21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 FBXL18Q96ME1 805 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 PNMA5Q96PV4 448 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 PAAF1Q9BRP4 392 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 GPR62Q9BZJ7 368 aa21■□□□□ 0.95
TNFRSF1A-212ENST00000539372 CASTOR2A6NHX0 329 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 K7ERI5 159 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 PTGESO14684 152 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 RAD51AP2Q09MP3 1159 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 DMP1Q13316 513 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 KIAA0319Q5VV43 1072 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 KIAA1841Q6NSI8 718 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 FUT10Q6P4F1 479 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 HASPINQ8TF76 798 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 EDAQ92838 391 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 DRC1Q96MC2 740 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 RIPOR3Q96MK2 946 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 NECTIN4Q96NY8 510 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 SSX2IPQ9Y2D8 614 aa20.99■□□□□ 0.95
TNFRSF1A-212ENST00000539372 SFI1A8K8P3 1242 aa20.98■□□□□ 0.95
TNFRSF1A-212ENST00000539372 TEX28O15482 410 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms