RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 KIFC3Q9BVG8 833 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.13□□□□□ -0.47
TNC-211ENST00000537320 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
TNC-211ENST00000537320 ACTR2P61160 394 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
TNC-211ENST00000537320 MKNK1Q9BUB5 465 aa12.13□□□□□ -0.47
TNC-211ENST00000537320 IRX4P78413 519 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 ASPHQ12797 758 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 DACT2Q5SW24 774 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 EFCAB13Q8IY85 973 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 SNX12Q9UMY4 172 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 IGSF9BQ9UPX0 1349 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 MAGEB2O15479 319 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 KRT7P08729 469 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 CETPP11597 493 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 VCAM1P19320 739 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 PCK1P35558 622 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 TMEM62Q0P6H9 643 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 IFT88Q13099 833 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 C6orf118Q5T5N4 469 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNC-211ENST00000537320 KLC2Q9H0B6 622 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 PARVAQ9NVD7 372 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 PPP1R9AQ9ULJ8 1098 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 FNDC3AQ9Y2H6 1198 aaKnown RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 LIG3P49916 1009 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 HUNKP57058 714 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 ADCY2Q08462 1091 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 NFIBO00712 420 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 ZNF185O15231 689 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 CHRNA3P32297 505 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 MMP14P50281 582 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 BIRC2Q13490 618 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 SEPT6Q14141 434 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 GRIK5Q16478 980 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 RBM43Q6ZSC3 357 aaKnown RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 FAM83AQ86UY5 434 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 TRIM59Q8IWR1 403 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 RDM1Q8NG50 284 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 RNPC3Q96LT9 517 aaKnown RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 TARS2Q9BW92 718 aaKnown RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 CNOT10Q9H9A5 744 aaKnown RBP12.12□□□□□ -0.47
TNC-211ENST00000537320 STAP1Q9ULZ2 295 aa12.12□□□□□ -0.47
TNC-211ENST00000537320 ARHGAP42A6NI28 874 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 HMGB1P1B2RPK0 211 aaPredicted RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 SMIM22K7EJ46 135 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 SART1O43290 800 aaKnown RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 KPNA2P52292 529 aaKnown RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 THOC5Q13769 683 aaKnown RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 LMNTD2Q8IXW0 634 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 SLC35G2Q8TBE7 412 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 ERGIC2Q96RQ1 377 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 TTC1Q99614 292 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 AGPAT3Q9NRZ7 376 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 SNX9Q9Y5X1 595 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 GOLGA8MH3BSY2 632 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 CA4P22748 312 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 ARL4CP56559 192 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 CDC42EP1Q00587 391 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 EFCAB12Q6NXP0 572 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 SKA2Q8WVK7 121 aaPredicted RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 CPA5Q8WXQ8 436 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 EXOC4Q96A65 974 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 ERAP1Q9NZ08 941 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 PLSCR1O15162 318 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 CREB3O43889 395 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 GYS2P54840 703 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 ZFPM1Q8IX07 1006 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 MCUQ8NE86 351 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 GDAP1Q8TB36 358 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 RAB3IPQ96QF0 476 aaPredicted RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 KLHL8Q9P2G9 620 aaPredicted RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 CELF2O95319 508 aaKnown RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 CTSHP09668 335 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 C9orf131Q5VYM1 1079 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
TNC-211ENST00000537320 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
TNC-211ENST00000537320 C3P01024 1663 aa12.1□□□□□ -0.47
TNC-211ENST00000537320 A0A1W2PQJ5 194 aa12.1□□□□□ -0.47
TNC-211ENST00000537320 HBP1O60381 514 aa12.1□□□□□ -0.47
TNC-211ENST00000537320 HLA-DRAP01903 254 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms