RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
CLSTN3-206ENST00000535668 INPP5FQ9Y2H2 1132 aa12.48□□□□□ -0.41
CLSTN3-206ENST00000535668 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
CLSTN3-206ENST00000535668 H0Y858 1186 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 NR1I2O75469 434 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 ERLIN2O94905 339 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 GLUD1P00367 558 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 ARF4P18085 180 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 MUTP22033 750 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 HOXA9P31269 272 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 GRIK3Q13003 919 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 CAPSQ13938 189 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 USP41Q3LFD5 358 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 SLC27A1Q6PCB7 646 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 PIK3AP1Q6ZUJ8 805 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 DYDC2Q96IM9 177 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 GAD1Q99259 594 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 EIF2AK1Q9BQI3 630 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 COLEC11Q9BWP8 271 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 EIF2AQ9BY44 585 aaKnown RBP12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 NT5C3AQ9H0P0 336 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 MIOSQ9NXC5 875 aa12.47□□□□□ -0.41
CLSTN3-206ENST00000535668 F5P12259 2224 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 CACNA1IQ9P0X4 2223 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 CLUHO75153 1309 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 ZBTB39O15060 712 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 POMCP01189 267 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 GLRA2P23416 452 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 NAB2Q15742 525 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 KANK3Q6NY19 840 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 TAS1R1Q7RTX1 841 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 SLC44A3Q8N4M1 653 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 FEZF2Q8TBJ5 459 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 SMOC2Q9H3U7 446 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 MAN1C1Q9NR34 630 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 DLGAP2Q9P1A6 1054 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
CLSTN3-206ENST00000535668 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 CCDC195A0A1B0GUA6 201 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 TMEM189-UBE2V1I3L0A0 370 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 HNRNPA1P09651 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 SRFP11831 508 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 LAMP2P13473 410 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 KRT2P35908 639 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 MLH1P40692 756 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 CTTNQ14247 550 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 ASCL5Q7RTU5 278 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 ASAP3Q8TDY4 903 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 PIK3R5Q8WYR1 880 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 ZFP42Q96MM3 310 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 POLR3CQ9BUI4 534 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 GPR62Q9BZJ7 368 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 GBP3Q9H0R5 595 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 TTC12Q9H892 705 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 TUFT1Q9NNX1 390 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 ORC3Q9UBD5 711 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 DNAH14Q0VDD8 3507 aa12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 TDRD15B5MCY1 1934 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-206ENST00000535668 TPRP12270 2363 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 INO80B-WBP1J3KQ70 363 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 TGM5O43548 720 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 ZMYND10O75800 440 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 SP100P23497 879 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 SCNN1GP51170 649 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 AK2P54819 239 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 NR5A1Q13285 461 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 TUSC3Q13454 348 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 UVSSAQ2YD98 709 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 LONRF3Q496Y0 759 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 ERMP1Q7Z2K6 904 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 TPH2Q8IWU9 490 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 NKD2Q969F2 451 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 DDX23Q9BUQ8 820 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 NXF3Q9H4D5 531 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 FAM86C1Q9NVL1 165 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 PRMT7Q9NVM4 692 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 FBXW11Q9UKB1 542 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 EPG5Q9HCE0 2579 aa12.44□□□□□ -0.42
CLSTN3-206ENST00000535668 SF3B1O75533 1304 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 KRBA1A5PL33 1030 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 PI15O43692 258 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms