RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TUFT1Q9NNX1 390 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 GPRC5CQ9NQ84 441 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 ANKEF1Q9NU02 776 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 INPP5FQ9Y2H2 1132 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 PPME1Q9Y570 386 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 PRUNE2Q8WUY3 3088 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 TTC3P53804 2025 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 PRRC2BQ5JSZ5 2229 aaKnown RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 UNC80Q8N2C7 3258 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 LRRIQ4A6NIV6 560 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 PP2D1A8MPX8 630 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 ASAP2O43150 1006 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 GAS2O43903 313 aaKnown RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 DGAT1O75907 488 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 LYPLA2O95372 231 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 ITGB1P05556 798 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 LINC00271P0C7V0 271 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 KCNA5P22460 613 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 CDC25AP30304 524 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 RARRES1P49788 294 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 ORC2Q13416 577 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 MXD4Q14582 209 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 AAK1Q2M2I8 961 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 TIGD5Q53EQ6 642 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 CLLU1OSQ5K130 101 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 DTHD1Q6ZMT9 781 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 RBM23Q86U06 439 aaKnown RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 SIX5Q8N196 739 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 C4orf32Q8N8J7 132 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 COLGALT1Q8NBJ5 622 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 ASAP3Q8TDY4 903 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 SNX29Q8TEQ0 813 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 POF1BQ8WVV4 589 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 CPB2Q96IY4 423 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 CASD1Q96PB1 797 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 PLIN2Q99541 437 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 POLR3CQ9BUI4 534 aaPredicted RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 APOL6Q9BWW8 343 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 PLVAPQ9BX97 442 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 RAB34Q9BZG1 259 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 TMEM117Q9H0C3 514 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 NSUN3Q9H649 340 aaKnown RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 ELAC1Q9H777 363 aaKnown RBP9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 XPNPEP1Q9NQW7 623 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 CHST12Q9NRB3 414 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 CLDND1Q9NY35 253 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 PLAGL2Q9UPG8 496 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 MAP4K5Q9Y4K4 846 aa9.91□□□□□ -0.82
CCDC90B-219ENST00000534753 REV3LO60673 3130 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 RALGAPA2Q2PPJ7 1873 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 VWA3AA6NCI4 1184 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 MEIS3P2A8K0S8 358 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 NT5C1B-RDH14C9J2C7 533 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 C5orf67F2Z3F1 127 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 H3BQ06 376 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 SSBP05455 408 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 DNAJB1P25685 340 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 RPA1P27694 616 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 GTF2F1P35269 517 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 GRM5P41594 1212 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 RNASELQ05823 741 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 NCBP1Q09161 790 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 CAPSQ13938 189 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 CLUL1Q15846 466 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 ECM1Q16610 540 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 RILPL1Q5EBL4 403 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 SRGAP1Q7Z6B7 1085 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 CDR2LQ86X02 465 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 SPPL3Q8TCT6 385 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 NECAB3Q96P71 396 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 UBE2ZQ9H832 354 aaPredicted RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 FAM105AQ9NUU6 356 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 DDX19AQ9NUU7 478 aaKnown RBP9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 RNF19AQ9NV58 838 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 COG5Q9UP83 839 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 PCDHGC5Q9Y5F6 944 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 ARID2Q68CP9 1835 aa9.9□□□□□ -0.82
CCDC90B-219ENST00000534753 COL4A6Q14031 1691 aa9.9□□□□□ -0.83
CCDC90B-219ENST00000534753 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 E9PMD0 336 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 SIAH2O43255 324 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 PRMT3O60678 531 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 ZC3H11AO75152 810 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 FGF18O76093 207 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 EOMESO95936 686 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 XRCC6P12956 609 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 ATF7P17544 494 aaPredicted RBP9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 LAG3P18627 525 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 GLRA2P23416 452 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 IRS1P35568 1242 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 ARL2P36404 184 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 PTENP60484 403 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 USP4Q13107 963 aa9.89□□□□□ -0.83
CCDC90B-219ENST00000534753 IL17AQ16552 155 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms