RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 RANBP2P49792 3224 aaKnown RBP11.46□□□□□ -0.57
CSDE1-217ENST00000534699 WNT7AO00755 349 aa11.46□□□□□ -0.58
CSDE1-217ENST00000534699 MCF2P10911 925 aa11.46□□□□□ -0.58
CSDE1-217ENST00000534699 GLUD2P49448 558 aa11.46□□□□□ -0.58
CSDE1-217ENST00000534699 XKR4Q5GH76 650 aa11.46□□□□□ -0.58
CSDE1-217ENST00000534699 ATAT1Q5SQI0 421 aa11.46□□□□□ -0.58
CSDE1-217ENST00000534699 SYCE2Q6PIF2 218 aa11.46□□□□□ -0.58
CSDE1-217ENST00000534699 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.58
CSDE1-217ENST00000534699 GRM5P41594 1212 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 GUCY1B3Q02153 619 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 DLX2Q07687 328 aaPredicted RBP11.45□□□□□ -0.58
CSDE1-217ENST00000534699 DMP1Q13316 513 aaPredicted RBP11.45□□□□□ -0.58
CSDE1-217ENST00000534699 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 ZPBP2Q6X784 338 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 FBXL18Q96ME1 805 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 NECAB3Q96P71 396 aaPredicted RBP11.45□□□□□ -0.58
CSDE1-217ENST00000534699 MRPL4Q9BYD3 311 aaKnown RBP11.45□□□□□ -0.58
CSDE1-217ENST00000534699 PDZD7Q9H5P4 517 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 TOPORSQ9NS56 1045 aaPredicted RBP11.45□□□□□ -0.58
CSDE1-217ENST00000534699 ZDHHC7Q9NXF8 308 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 ARHGAP28Q9P2N2 729 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 DDHD2O94830 711 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 COL9A1P20849 921 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 GJB2P29033 226 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 HOXA9P31269 272 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 SMTNP53814 917 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 TMEM119Q4V9L6 283 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 KIAA0319Q5VV43 1072 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 EP400NLQ6ZTU2 488 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 GPR149Q86SP6 731 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 RNF135Q8IUD6 432 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 LPPQ93052 612 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 EPHX3Q9H6B9 360 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 KIAA1024Q9UPX6 916 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 HCFC2Q9Y5Z7 792 aa11.45□□□□□ -0.58
CSDE1-217ENST00000534699 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 K7ERI5 159 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 ZBTB39O15060 712 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 NPTXRO95502 500 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 MAPTP10636 758 aaKnown RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 C1orf186Q6ZWK4 172 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 HVCN1Q96D96 273 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 CALML4Q96GE6 196 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 ZNF668Q96K58 619 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 PLEKHA5Q9HAU0 1116 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 DDX19AQ9NUU7 478 aaKnown RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 INPP5FQ9Y2H2 1132 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■■■■ 28.6
CSDE1-217ENST00000534699 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 THP07101 528 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 RPL9P32969 192 aaKnown RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 CLCN4P51793 760 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 ZXDAP98168 799 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 STAMQ92783 540 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 CDK5RAP3Q96JB5 506 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 EIF2AQ9BY44 585 aaKnown RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 CCSER1Q9C0I3 900 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 BHMT2Q9H2M3 363 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 ADAM28Q9UKQ2 775 aa11.44□□□□□ -0.58
CSDE1-217ENST00000534699 BARX2Q9UMQ3 279 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-217ENST00000534699 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 CSDE1O75534 798 aaKnown RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 HNRNPA1P09651 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 YARSP54577 528 aaKnown RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 SIGLEC14Q08ET2 396 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ATF7IP2Q5U623 682 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 LARP1BQ659C4 914 aaKnown RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 RINT1Q6NUQ1 792 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 DCLRE1AQ6PJP8 1040 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 OTOP3Q7RTS5 596 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ZNF280BQ86YH2 543 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 CD302Q8IX05 232 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 GAD1Q99259 594 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 CD320Q9NPF0 282 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 LARSQ9P2J5 1176 aaKnown RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PIGRP01833 764 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PLS3P13797 630 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 KCNE1P15382 129 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PROZP22891 400 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 GTF2F1P35269 517 aaKnown RBP eCLIP11.43□□□□□ -0.581e-7■■■■■ 29.4
CSDE1-217ENST00000534699 UVSSAQ2YD98 709 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 CABP7Q86V35 215 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ACSF2Q96CM8 615 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ZSCAN16Q9H4T2 348 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PTPRHQ9HD43 1115 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 KLRC2P26717 231 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PLA2G5P39877 138 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 STRN3Q13033 797 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 FUT10Q6P4F1 479 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 RBM23Q86U06 439 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms