RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RPS19P39019 145 aaKnown RBP8.41□□□□□ -1.06
CASP4-213ENST00000534356 NPEPPSP55786 919 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 UAP1L1Q3KQV9 507 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 FUKQ8N0W3 1084 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 MIER2Q8N344 545 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.41□□□□□ -1.06
CASP4-213ENST00000534356 CAMKK2Q96RR4 588 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 TCF25Q9BQ70 676 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 BDH2Q9BUT1 245 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 CSRNP2Q9H175 543 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 TCEAL9Q9UHQ7 104 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 SAP30BPQ9UHR5 308 aaKnown RBP8.41□□□□□ -1.06
CASP4-213ENST00000534356 RAPGEFL1Q9UHV5 662 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 ZFR2Q9UPR6 939 aaKnown RBP8.41□□□□□ -1.06
CASP4-213ENST00000534356 SIK3Q9Y2K2 1263 aa8.41□□□□□ -1.06
CASP4-213ENST00000534356 CCDC154A6NI56 674 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 GASTP01350 101 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 SLC6A9P48067 706 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 GRM7Q14831 915 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 PPP2R5AQ15172 486 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 C3orf36Q3SXR2 165 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 REPS2Q8NFH8 660 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 BCO1Q9HAY6 547 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 PLA2G3Q9NZ20 509 aa8.4□□□□□ -1.06
CASP4-213ENST00000534356 FAM171A2A8MVW0 826 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 RAD17O75943 681 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 STC2O76061 302 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 SCGB1D2O95969 90 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 CRHR1P34998 444 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 SREBF1P36956 1147 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 CTSWP56202 376 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 GJC2Q5T442 439 aaPredicted RBP8.39□□□□□ -1.07
CASP4-213ENST00000534356 FAM111BQ6SJ93 734 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 PQLC1Q8N2U9 271 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 OR7D4Q8NG98 312 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 MDM1Q8TC05 714 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 PCDHA13Q9Y5I0 950 aa8.39□□□□□ -1.07
CASP4-213ENST00000534356 ZMYM3Q14202 1370 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 RFPL1O75677 317 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 ENDOD1O94919 500 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 PER3P56645 1201 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 FOXL1Q12952 345 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 IL10RAQ13651 578 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 FAM214AQ32MH5 1076 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 RRP12Q5JTH9 1297 aaKnown RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 PRAMEF14Q5SWL7 426 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 CHPFQ8IZ52 775 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 TRMT2AQ8IZ69 625 aaKnown RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 FBXO18Q8NFZ0 1043 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 CXorf38Q8TB03 319 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 ARL8AQ96BM9 186 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 IL17RAQ96F46 866 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 UHRF1Q96T88 793 aaPredicted RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 CDC5LQ99459 802 aaKnown RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 NUP88Q99567 741 aaPredicted RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 C7orf25Q9BPX7 421 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 PNMA8BQ9ULN7 279 aaPredicted RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 NOB1Q9ULX3 412 aaKnown RBP8.38□□□□□ -1.07
CASP4-213ENST00000534356 SLC30A1Q9Y6M5 507 aa8.38□□□□□ -1.07
CASP4-213ENST00000534356 PATE3B3GLJ2 98 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 WNT10BO00744 389 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 TSPAN6O43657 245 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 MSX2P35548 267 aaPredicted RBP8.37□□□□□ -1.07
CASP4-213ENST00000534356 GZMKP49863 264 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 MRPL49Q13405 166 aaKnown RBP8.37□□□□□ -1.07
CASP4-213ENST00000534356 ICAM4Q14773 271 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 DNERQ8NFT8 737 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 TSR2Q969E8 191 aaKnown RBP8.37□□□□□ -1.07
CASP4-213ENST00000534356 HDAC10Q969S8 669 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 LDAHQ9H6V9 325 aa8.37□□□□□ -1.07
CASP4-213ENST00000534356 HOXA3O43365 443 aaPredicted RBP8.36□□□□□ -1.07
CASP4-213ENST00000534356 PARNO95453 639 aaKnown RBP8.36□□□□□ -1.07
CASP4-213ENST00000534356 POU2F2P09086 479 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 VCAM1P19320 739 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 PDCP20941 246 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 PTPN7P35236 360 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 APBA1Q02410 837 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 MIGA2Q7L4E1 593 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 RHOT1Q8IXI2 618 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 Q8TCH9 128 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 CCHCR1Q8TD31 782 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 KAT5Q92993 513 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 CEP95Q96GE4 821 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 ZNF512Q96ME7 567 aaPredicted RBP8.36□□□□□ -1.07
CASP4-213ENST00000534356 SH3BP1Q9Y3L3 701 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
CASP4-213ENST00000534356 FANCD2Q9BXW9 1451 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 PRPF3O43395 683 aaKnown RBP8.35□□□□□ -1.07
CASP4-213ENST00000534356 AKAP5P24588 427 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 FXR1P51114 621 aaKnown RBP eCLIP8.35□□□□□ -1.07
CASP4-213ENST00000534356 PLP2Q04941 152 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 FKBP15Q5T1M5 1219 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 FMNL3Q8IVF7 1028 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 STON2Q8WXE9 905 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms