RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 CCDC149Q6ZUS6 474 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 TMEM173Q86WV6 379 aaPredicted RBP10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 KREMEN2Q8NCW0 462 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 HAS1Q92839 578 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 CCDC51Q96ER9 411 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 EIF2AK1Q9BQI3 630 aaKnown RBP10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 MFSD1Q9H3U5 465 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 TTC12Q9H892 705 aaPredicted RBP10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 GJB4Q9NTQ9 266 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 MYO10Q9HD67 2058 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 C2CD4DB7Z1M9 353 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 C2CD2LO14523 706 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 ADH1AP07327 375 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 WEE2P0C1S8 567 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 EPCAMP16422 314 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 TXKP42681 527 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 OR1G1P47890 313 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 NR5A1Q13285 461 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 PTPN14Q15678 1187 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 TMC5Q6UXY8 1006 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 MRPL10Q7Z7H8 261 aaKnown RBP10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 C12orf76Q8N812 135 aaPredicted RBP10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 ZNF516Q92618 1163 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 GTF3C6Q969F1 213 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 RPS6KC1Q96S38 1066 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 APOL6Q9BWW8 343 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 MINDY3Q9H8M7 445 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 ANKEF1Q9NU02 776 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 WRAP73Q9P2S5 460 aaPredicted RBP10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 USTQ9Y2C2 406 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 PRG3Q9Y2Y8 225 aaPredicted RBP10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 IPPQ9Y573 584 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 ZNF318Q5VUA4 2279 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 MTCL1Q9Y4B5 1905 aaKnown RBP10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 PLXNA3P51805 1871 aa10.7□□□□□ -0.7
PPFIA1-223ENST00000532793 NRP1O14786 923 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 TSPAN1O60635 241 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 DDHD2O94830 711 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 SLITRK3O94933 977 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 SOD2P04179 222 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 MLH1P40692 756 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 GLUD2P49448 558 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 PTENP60484 403 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 GNL2Q13823 731 aaKnown RBP10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 OTOP3Q7RTS5 596 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 ZBTB8OSQ8IWT0 167 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 DIS3L2Q8IYB7 885 aaKnown RBP10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 ZDHHC14Q8IZN3 488 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 NECAB1Q8N987 351 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 PRSS33Q8NF86 280 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 ERMNQ8TAM6 284 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 STAMQ92783 540 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 CPB2Q96IY4 423 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 KLHL5Q96PQ7 755 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 GAD1Q99259 594 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 HERC2P3Q9BVR0 1158 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 COLEC11Q9BWP8 271 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 CSRNP2Q9H175 543 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 CDH22Q9UJ99 828 aa10.69□□□□□ -0.7
PPFIA1-223ENST00000532793 MUC6Q6W4X9 2439 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 LRRIQ4A6NIV6 560 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 BTBD18B2RXH4 712 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 USO1O60763 962 aaKnown RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 DTNBO60941 627 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 LYPLA2O95372 231 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 CTDNEP1O95476 244 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 GLUD1P00367 558 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 CNPP09543 421 aaKnown RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 ATP2B1P20020 1258 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 AVPR2P30518 371 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 HOXA11P31270 313 aaPredicted RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 CLCN4P51793 760 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 NEK4P51957 841 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 POU5F1BQ06416 359 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 SPIRE1Q08AE8 756 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 CAPSQ13938 189 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 ME3Q16798 604 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 EARS2Q5JPH6 523 aaKnown RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 UBXN11Q5T124 520 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 C15orf39Q6ZRI6 1047 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 SLC22A17Q8WUG5 538 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 BCL7CQ8WUZ0 217 aaPredicted RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 ATOH1Q92858 354 aaPredicted RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 ASIC4Q96FT7 647 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 EIF2AQ9BY44 585 aaKnown RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 POLR3FQ9H1D9 316 aaPredicted RBP10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 PIDD1Q9HB75 910 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 MAN1C1Q9NR34 630 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 PARP2Q9UGN5 583 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 LIMD1Q9UGP4 676 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
PPFIA1-223ENST00000532793 ARL5CA6NH57 179 aa10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 ZBTB39O15060 712 aa10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 NPTXRO95502 500 aa10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 BRD1O95696 1058 aa10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 ASGR2P07307 311 aa10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 XRCC6P12956 609 aaKnown RBP eCLIP10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 FDPSP14324 419 aaKnown RBP10.67□□□□□ -0.7
PPFIA1-223ENST00000532793 RFX1P22670 979 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms