RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CD44P16070 742 aaKnown RBP18.51■□□□□ 0.55
SF3B2-211ENST00000531041 GARTP22102 1010 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 ADSSP30520 456 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 NOLC1Q14978 699 aaKnown RBP eCLIP18.51■□□□□ 0.55
SF3B2-211ENST00000531041 CENPPQ6IPU0 288 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 SASS6Q6UVJ0 657 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 MRPL10Q7Z7H8 261 aaKnown RBP18.51■□□□□ 0.55
SF3B2-211ENST00000531041 ECHDC2Q86YB7 292 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 CRIPAKQ8N1N5 446 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
SF3B2-211ENST00000531041 DHTKD1Q96HY7 919 aaPredicted RBP18.51■□□□□ 0.55
SF3B2-211ENST00000531041 ELAC1Q9H777 363 aaKnown RBP18.51■□□□□ 0.55
SF3B2-211ENST00000531041 PSMA7O14818 248 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 AMHP03971 560 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 MATR3P43243 847 aaKnown RBP eCLIP18.5■□□□□ 0.55
SF3B2-211ENST00000531041 KCNJ6P48051 423 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 SHHQ15465 462 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 C9orf50Q5SZB4 431 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 ZBTB33Q86T24 672 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 ZNF598Q86UK7 904 aaKnown RBP18.5■□□□□ 0.55
SF3B2-211ENST00000531041 SMG8Q8ND04 991 aaKnown RBP18.5■□□□□ 0.55
SF3B2-211ENST00000531041 TMEM174Q8WUU8 243 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 POMGNT1Q8WZA1 660 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 SEMA6BQ9H3T3 888 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 AGPAT3Q9NRZ7 376 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 TMEM161AQ9NX61 479 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 CXXC1Q9P0U4 656 aaPredicted RBP18.5■□□□□ 0.55
SF3B2-211ENST00000531041 TRAF3IP3Q9Y228 551 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 IPPQ9Y573 584 aa18.5■□□□□ 0.55
SF3B2-211ENST00000531041 ZBBXA8MT70 800 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
SF3B2-211ENST00000531041 OGTO15294 1046 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 ATF7P17544 494 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-211ENST00000531041 DEFB103AP81534 67 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 ZCWPW2Q504Y3 356 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 NPAS4Q8IUM7 802 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 C12orf56Q8IXR9 622 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 TOP1MTQ969P6 601 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 PGBD4Q96DM1 585 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 MSTO1Q9BUK6 570 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 SLC4A7Q9Y6M7 1214 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 CALUO43852 315 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-211ENST00000531041 FAM189A1O60320 539 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 STAG3L1P0CL83 205 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 CCNE1P24864 410 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 GRM5P41594 1212 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 NFIL3Q16649 462 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 KYAT1Q16773 422 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 DPCR1Q3MIW9 517 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 FOXR2Q6PJQ5 311 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 HACE1Q8IYU2 909 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 PHOSPHO2Q8TCD6 241 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 P2RX5Q93086 422 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 RNPC3Q96LT9 517 aaKnown RBP18.49■□□□□ 0.55
SF3B2-211ENST00000531041 SLC9A7Q96T83 725 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 CBWD1Q9BRT8 395 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 PRO3102Q9H379 93 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 NXF3Q9H4D5 531 aaKnown RBP18.49■□□□□ 0.55
SF3B2-211ENST00000531041 AGO2Q9UKV8 859 aaKnown RBP18.49■□□□□ 0.55
SF3B2-211ENST00000531041 PCDHB7Q9Y5E2 793 aa18.49■□□□□ 0.55
SF3B2-211ENST00000531041 CLIC2O15247 247 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 LDHAP00338 332 aaKnown RBP18.48■□□□□ 0.55
SF3B2-211ENST00000531041 HARSP12081 509 aaKnown RBP18.48■□□□□ 0.55
SF3B2-211ENST00000531041 MYBPC2Q14324 1141 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 EDRF1Q3B7T1 1238 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 CT47A1Q5JQC4 288 aaPredicted RBP18.48■□□□□ 0.55
SF3B2-211ENST00000531041 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 CEP120Q8N960 986 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 ANO10Q9NW15 660 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 DMAC2Q9NW81 257 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 DACH1Q9UI36 760 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 LRFN2Q9ULH4 789 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 HES2Q9Y543 173 aa18.48■□□□□ 0.55
SF3B2-211ENST00000531041 COL4A6Q14031 1691 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 ITGA4P13612 1032 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 LRRC63Q05C16 580 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 PAK1Q13153 545 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 STX1AQ16623 288 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 ZSCAN23Q3MJ62 389 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 ANKRD40Q6AI12 368 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 AGMOQ6ZNB7 445 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 THNSL1Q8IYQ7 743 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 NELFBQ8WX92 580 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 CCDC94Q9BW85 323 aaPredicted RBP18.47■□□□□ 0.55
SF3B2-211ENST00000531041 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 PCIF1Q9H4Z3 704 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 UBN1Q9NPG3 1134 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 SNTG2Q9NY99 539 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
SF3B2-211ENST00000531041 NLRC5Q86WI3 1866 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 KIAA1671Q9BY89 1806 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 BICDL2A1A5D9 508 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 SYCE3A1L190 88 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 MEIS3P2A8K0S8 358 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 UPP2O95045 317 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 NR3C1P04150 777 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 CLTAP09496 248 aa18.46■□□□□ 0.55
SF3B2-211ENST00000531041 PMS1P54277 932 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms