RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 DPYDQ12882 1025 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 L1TD1Q5T7N2 865 aaKnown RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 CDR2LQ86X02 465 aaPredicted RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 CMTR2Q8IYT2 770 aaKnown RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 ABI1Q8IZP0 508 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 RNF169Q8NCN4 708 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 SMG8Q8ND04 991 aaKnown RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 SP7Q8TDD2 431 aaPredicted RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 NECAB3Q96P71 396 aaPredicted RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 ACCSQ96QU6 501 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 TMEM117Q9H0C3 514 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 TMEM206Q9H813 350 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 EXOC1Q9NV70 894 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 USP20Q9Y2K6 914 aa16.76■□□□□ 0.27
CCS-206ENST00000530961 YBX2Q9Y2T7 364 aaKnown RBP16.76■□□□□ 0.27
CCS-206ENST00000530961 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
CCS-206ENST00000530961 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCS-206ENST00000530961 CLDN3O15551 220 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 KLRC4O43908 158 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 GPR37L1O60883 481 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 NPTXRO95502 500 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 RPN1P04843 607 aaKnown RBP16.75■□□□□ 0.27
CCS-206ENST00000530961 MCF2P10911 925 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 ITGA4P13612 1032 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 KMT5BQ4FZB7 885 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 SLFN12LQ6IEE8 588 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 GLB1LQ6UWU2 654 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 MPZL3Q6UWV2 235 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 SLC28A3Q9HAS3 691 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 RC3H2Q9HBD1 1191 aaKnown RBP16.75■□□□□ 0.27
CCS-206ENST00000530961 LMBRD1Q9NUN5 540 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 GIT1Q9Y2X7 761 aa16.75■□□□□ 0.27
CCS-206ENST00000530961 TRIP12Q14669 1992 aaPredicted RBP16.75■□□□□ 0.27
CCS-206ENST00000530961 TANC1Q9C0D5 1861 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 SMC2O95347 1197 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 CA3P07451 260 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 MYBP10242 640 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 FGFR1P11362 822 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 MYOGP15173 224 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 CASP5P51878 434 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 MCL1Q07820 350 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 BTG3Q14201 252 aaPredicted RBP16.74■□□□□ 0.27
CCS-206ENST00000530961 KCNB1Q14721 858 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 ZNF568Q3ZCX4 644 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 AGMOQ6ZNB7 445 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 ZNF507Q8TCN5 953 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 NKX2-4Q9H2Z4 354 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 RSAD1Q9HA92 442 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 RNF19AQ9NV58 838 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 RMND1Q9NWS8 449 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 KAT6AQ92794 2004 aa16.74■□□□□ 0.27
CCS-206ENST00000530961 TBKBP1A7MCY6 615 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 ABLIM1O14639 778 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 OFD1O75665 1012 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 RHOBTB3O94955 611 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 KYAT1Q16773 422 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 CLLU1OSQ5K130 101 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 EPM2AIP1Q7L775 607 aaPredicted RBP16.73■□□□□ 0.27
CCS-206ENST00000530961 SYCP3Q8IZU3 236 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 FIBCD1Q8N539 461 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 LPPQ93052 612 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 CASD1Q96PB1 797 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 GSDMAQ96QA5 445 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 MRPL9Q9BYD2 267 aaKnown RBP16.73■□□□□ 0.27
CCS-206ENST00000530961 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
CCS-206ENST00000530961 CDT1Q9H211 546 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 NXF3Q9H4D5 531 aaKnown RBP16.73■□□□□ 0.27
CCS-206ENST00000530961 ZNF576Q9H609 170 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 SLC39A2Q9NP94 309 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 HES2Q9Y543 173 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 STYXL1Q9Y6J8 313 aa16.73■□□□□ 0.27
CCS-206ENST00000530961 UBE4BO95155 1302 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 LCHNA4D1U4 455 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 INPPL1O15357 1258 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
CCS-206ENST00000530961 KIF20AO95235 890 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 GRM5P41594 1212 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 GATMP50440 423 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 SNRPFP62306 86 aaKnown RBP16.72■□□□□ 0.27
CCS-206ENST00000530961 FOXK2Q01167 660 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 TAP1Q03518 808 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 KCNA1Q09470 495 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 STK4Q13043 487 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 PNOCQ13519 176 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
CCS-206ENST00000530961 BMT2Q1RMZ1 405 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 AAK1Q2M2I8 961 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 NOMO2Q5JPE7 1267 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 ZBTB33Q86T24 672 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 SPATA20Q8TB22 786 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 HELQQ8TDG4 1101 aa16.72■□□□□ 0.27
CCS-206ENST00000530961 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms