RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NR3C1P04150 777 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 TCP1P17987 556 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 GRNP28799 593 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 PSMC2P35998 433 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 STAT3P40763 770 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 PRKCIP41743 596 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 KIF11P52732 1056 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 BACE1P56817 501 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 AMPD2Q01433 879 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 PTPN21Q16825 1174 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 ERCC6LQ2NKX8 1250 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 NBPF9Q3BBW0 867 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 KIAA1755Q5JYT7 1200 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 IER5Q5VY09 327 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 CCDC70Q6NSX1 233 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 CCDC174Q6PII3 467 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 FBXO38Q6PIJ6 1188 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 SHISA2Q6UWI4 295 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 GBP6Q6ZN66 633 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 RRAGAQ7L523 313 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 TRAPPC11Q7Z392 1133 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 C12orf56Q8IXR9 622 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 C4orf19Q8IY42 314 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 SMAP1Q8IYB5 467 aaPredicted RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 KRT222Q8N1A0 295 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 SLC35F6Q8N357 371 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 MSANTD4Q8NCY6 345 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 NUDT8Q8WV74 236 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 SCG3Q8WXD2 468 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 CLEC4DQ8WXI8 215 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 GPRASP2Q96D09 838 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 DRC1Q96MC2 740 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 CHP1Q99653 195 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 SENP7Q9BQF6 1050 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 TMEM206Q9H813 350 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 JPH1Q9HDC5 661 aaPredicted RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 ARFGAP3Q9NP61 516 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 JADE2Q9NQC1 790 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 FAM207AQ9NSI2 230 aaPredicted RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 ANKEF1Q9NU02 776 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 DNAJB12Q9NXW2 375 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 RAB21Q9UL25 225 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 INTUQ9ULD6 942 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 BCS1LQ9Y276 419 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 FRMD4BQ9Y2L6 1034 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 REXO2Q9Y3B8 237 aaKnown RBP6.08□□□□□ -1.44
PCF11-205ENST00000530906 SAR1BQ9Y6B6 198 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 LOC285556D6RIA3 1793 aa6.08□□□□□ -1.44
PCF11-205ENST00000530906 ASTN1O14525 1302 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PHIPQ8WWQ0 1821 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 A0A0U1RQG5 324 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 LRRC53A6NM62 1247 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 WDR64B1ANS9 1081 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 H0YCG3 227 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 VWA5AO00534 786 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 CES2O00748 559 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PMM2O15305 246 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 FLOT1O75955 427 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 CLSTN1O94985 981 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 GCNT3O95395 438 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ITGB5P18084 799 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 VCAM1P19320 739 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 CCND2P30279 289 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 INPP5BP32019 993 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 EIF4A3P38919 411 aaKnown RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 QARSP47897 775 aaKnown RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 GMPSP49915 693 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 SNAP25P60880 206 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PSMC5P62195 406 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PSMC6P62333 389 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 HERVK_113P62684 666 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 GABPB1Q06547 395 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 CETN1Q12798 172 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 MTMR1Q13613 665 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 LRRC41Q15345 812 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 HIF1AQ16665 826 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 EXOC3L4Q17RC7 722 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ASTE1Q2TB18 679 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 SUPT20HL1Q3ZLR7 823 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 MAP9Q49MG5 647 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PSAPL1Q6NUJ1 521 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ZNF746Q6NUN9 644 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 WDR93Q6P2C0 686 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 MIGA2Q7L4E1 593 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ZNF720Q7Z2F6 126 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 ZNF572Q7Z3I7 529 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 MIER3Q7Z3K6 550 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 DEFB132Q7Z7B7 95 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 USP37Q86T82 979 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 NLRX1Q86UT6 975 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 TPH2Q8IWU9 490 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 NELFCDQ8IXH7 590 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 FAM178BQ8IXR5 827 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 MYCT1Q8N699 235 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 SYTL5Q8TDW5 730 aaPredicted RBP6.07□□□□□ -1.44
PCF11-205ENST00000530906 KCNN1Q92952 543 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 HPS3Q969F9 1004 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 DYDC2Q96IM9 177 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 PKNOX2Q96KN3 472 aa6.07□□□□□ -1.44
PCF11-205ENST00000530906 NOX5Q96PH1 765 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms