RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ATP2A2P16615 1042 aaKnown RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 LIG4P49917 911 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 MORC3Q14149 939 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 KNOP1Q1ED39 458 aaKnown RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 FAM109BQ6ICB4 259 aaPredicted RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 CDR2LQ86X02 465 aaPredicted RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 GUF1Q8N442 669 aaKnown RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 PGBD4Q96DM1 585 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 ZBTB45Q96K62 511 aaPredicted RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 CDT1Q9H211 546 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 RC3H2Q9HBD1 1191 aaKnown RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 UBN1Q9NPG3 1134 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 MAN1B1Q9UKM7 699 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 IPPQ9Y573 584 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 COL4A6Q14031 1691 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 TRIP11Q15643 1979 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 INPPL1O15357 1258 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 TGFB1I1O43294 461 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 NPTXRO95502 500 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 GARTP22102 1010 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 ADSSP30520 456 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 POU5F1Q01860 360 aaKnown RBP17.55■□□□□ 0.4
BRK1-201ENST00000530758 KLHL40Q2TBA0 621 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 KCTD10Q9H3F6 313 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 RNF19AQ9NV58 838 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 GDAQ9Y2T3 454 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 CITO14578 2027 aa17.55■□□□□ 0.4
BRK1-201ENST00000530758 CHD9Q3L8U1 2897 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 CDH23Q9H251 3354 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 PDXKO00764 312 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 KIAA0391O15091 583 aaKnown RBP17.54■□□□□ 0.4
BRK1-201ENST00000530758 HOXA2O43364 376 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 FAM189A1O60320 539 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 BMP6P22004 513 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 GRM5P41594 1212 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 SMAD3P84022 425 aaKnown RBP17.54■□□□□ 0.4
BRK1-201ENST00000530758 KYAT1Q16773 422 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 TMEM132AQ24JP5 1023 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 ZNF568Q3ZCX4 644 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 AGMOQ6ZNB7 445 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 C12orf56Q8IXR9 622 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 HACE1Q8IYU2 909 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
BRK1-201ENST00000530758 BICD1Q96G01 975 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 GUCD1Q96NT3 240 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 RAD9AQ99638 391 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
BRK1-201ENST00000530758 LRFN2Q9ULH4 789 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 GIT1Q9Y2X7 761 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 INSL6Q9Y581 213 aa17.54■□□□□ 0.4
BRK1-201ENST00000530758 ADRB2P07550 413 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 ITGA4P13612 1032 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 PPP1R2P41236 205 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 PRCPP42785 496 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 NOLC1Q14978 699 aaKnown RBP eCLIP17.53■□□□□ 0.4
BRK1-201ENST00000530758 NFIL3Q16649 462 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 ADSSL1Q8N142 457 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 IKZF4Q9H2S9 585 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
BRK1-201ENST00000530758 TRAF3IP3Q9Y228 551 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 PCDHA11Q9Y5I1 949 aa17.53■□□□□ 0.4
BRK1-201ENST00000530758 MEIS3P2A8K0S8 358 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 TISP43B9A030 160 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 OGTO15294 1046 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 OFD1O75665 1012 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 UPP2O95045 317 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 MYBPC2Q14324 1141 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
BRK1-201ENST00000530758 XKR4Q5GH76 650 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 CLLU1OSQ5K130 101 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 CCDC183Q5T5S1 534 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 CENPPQ6IPU0 288 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 FOXR2Q6PJQ5 311 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 ALKAL1Q6UXT8 129 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 TMCO2Q7Z6W1 182 aaPredicted RBP17.52■□□□□ 0.4
BRK1-201ENST00000530758 GOLGA5Q8TBA6 731 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 CASD1Q96PB1 797 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 NXF3Q9H4D5 531 aaKnown RBP17.52■□□□□ 0.4
BRK1-201ENST00000530758 TYW1Q9NV66 732 aaKnown RBP17.52■□□□□ 0.4
BRK1-201ENST00000530758 HES2Q9Y543 173 aa17.52■□□□□ 0.4
BRK1-201ENST00000530758 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
BRK1-201ENST00000530758 TDRD15B5MCY1 1934 aaKnown RBP17.51■□□□□ 0.39
BRK1-201ENST00000530758 GRXCR1A8MXD5 290 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 LDHAP00338 332 aaKnown RBP17.51■□□□□ 0.39
BRK1-201ENST00000530758 CLTAP09496 248 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 ANK1P16157 1881 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 ZCWPW2Q504Y3 356 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 HS2ST1Q7LGA3 356 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 SLC9A9Q8IVB4 645 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 NELFCDQ8IXH7 590 aa17.51■□□□□ 0.39
BRK1-201ENST00000530758 CMTR2Q8IYT2 770 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms