RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 NOGQ13253 232 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 TMEM132BQ14DG7 1078 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 CT47A1Q5JQC4 288 aaPredicted RBP6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 PHF19Q5T6S3 580 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 TEPPQ6URK8 271 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 ATG14Q6ZNE5 492 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 CTU1Q7Z7A3 348 aaKnown RBP6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 CHTF18Q8WVB6 975 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 CELF1Q92879 486 aaKnown RBP6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 DBNDD1Q9H9R9 158 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 SAGE1Q9NXZ1 904 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 WASF3Q9UPY6 502 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 ZKSCAN5Q9Y2L8 839 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 FAN1Q9Y2M0 1017 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 DUOX1Q9NRD9 1551 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 LAMB2P55268 1798 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 SHTN1A0MZ66 631 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 PRAMEF25A6NGN4 478 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 ECE2O60344 883 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 F2P00734 622 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 FAHP16930 419 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 PFKLP17858 780 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 HUNKP57058 714 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 GPSM2P81274 684 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 FOXO4P98177 505 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 DSG1Q02413 1049 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 SSPNQ14714 243 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 ZNF124Q15973 351 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 TBC1D10BQ4KMP7 808 aaPredicted RBP6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 TMC5Q6UXY8 1006 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 OTOP1Q7RTM1 612 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 KRT26Q7Z3Y9 468 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 DCPSQ96C86 337 aaKnown RBP6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 NOX5Q96PH1 765 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 BOCQ9BWV1 1114 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 POLLQ9UGP5 575 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 NUB1Q9Y5A7 615 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 LRRC37AA6NMS7 1700 aa6.4□□□□□ -1.38
AMBRA1-209ENST00000529963 GAS7O60861 476 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 CLASP2O75122 1294 aaKnown RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 C4BPAP04003 597 aaKnown RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 VIL1P09327 827 aaKnown RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 SLC9A1P19634 815 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 IGFBP6P24592 240 aaPredicted RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 SOX5P35711 763 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 ID4P47928 161 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 SCNN1BP51168 640 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 CALD1Q05682 793 aaKnown RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 DDX10Q13206 875 aaKnown RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 TARBP2Q15633 366 aaKnown RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 CREB3L3Q68CJ9 461 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 LIPIQ6XZB0 460 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 TMEFF1Q8IYR6 380 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 TBC1D16Q8TBP0 767 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 ZSWIM3Q96MP5 696 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 CHMP4AQ9BY43 222 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 RNF38Q9H0F5 515 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 GBA2Q9HCG7 927 aaPredicted RBP6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 OXSMQ9NWU1 459 aa6.4□□□□□ -1.39
AMBRA1-209ENST00000529963 AKAP11Q9UKA4 1901 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 RTL9Q8NET4 1388 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 ADM5C9JUS6 153 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 HIP1RO75146 1068 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 UFL1O94874 794 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 PI3P19957 117 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 THBS2P35442 1172 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 KIF11P52732 1056 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 IL2P60568 153 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 GNAI1P63096 354 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 NKX3-2P78367 333 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 SMAD4Q13485 552 aaKnown RBP6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 SART3Q15020 963 aaKnown RBP6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 CCDC152Q4G0S7 254 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 RGMBQ6NW40 437 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 PROSER1Q86XN7 944 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 KIAA1958Q8N8K9 716 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 CCDC191Q8NCU4 936 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 OR2W6PQ8NHA6 318 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 TTLL11Q8NHH1 800 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 CPA5Q8WXQ8 436 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 GPATCH3Q96I76 525 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 GORASP1Q9BQQ3 440 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 EPB41L4AQ9HCS5 686 aaPredicted RBP6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 SLC39A2Q9NP94 309 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 SMG5Q9UPR3 1016 aaKnown RBP6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 IRAK3Q9Y616 596 aa6.39□□□□□ -1.39
AMBRA1-209ENST00000529963 DDX60Q8IY21 1712 aaKnown RBP6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 NFIBO00712 420 aa6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 DDX58O95786 925 aaKnown RBP6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 PCCAP05165 728 aaPredicted RBP6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 MMEP08473 750 aa6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 CYP2C8P10632 490 aa6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 POU3F3P20264 500 aaPredicted RBP6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 GLDCP23378 1020 aa6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 PTX3P26022 381 aaPredicted RBP6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 ADCYAP1R1P41586 468 aa6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 NFKB2Q00653 900 aa6.38□□□□□ -1.39
AMBRA1-209ENST00000529963 ARHGAP44Q17R89 818 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms