RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 FOXK2Q01167 660 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 GIT2Q14161 759 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 NPY5RQ15761 445 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 LETM2Q2VYF4 491 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 XKR3Q5GH77 459 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 GLB1LQ6UWU2 654 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 MIER3Q7Z3K6 550 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 MRPL10Q7Z7H8 261 aaKnown RBP9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 TBCKQ8TEA7 893 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 NLRP4Q96MN2 994 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 JAKMIP1Q96N16 626 aaKnown RBP9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 MYADMQ96S97 322 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 NCOA5Q9HCD5 579 aaKnown RBP9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 AGPAT5Q9NUQ2 364 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 MIOSQ9NXC5 875 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 PCDHB2Q9Y5E7 798 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 R4GN57 208 aa9.55□□□□□ -0.88
TGFBR3-208ENST00000529608 PATJQ8NI35 1801 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 M0R2N6 131 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 TEX28O15482 410 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 DTNBO60941 627 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 SPATA31D3P0C874 917 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 SFPQP23246 707 aaKnown RBP eCLIP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 USP11P51784 963 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 CCT2P78371 535 aaKnown RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 RNASELQ05823 741 aaKnown RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 Q4G0T1 1027 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 C15orf39Q6ZRI6 1047 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 SPATA31D4Q6ZUB0 917 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 OTOP3Q7RTS5 596 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 CATSPER4Q7RTX7 472 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 ZNF410Q86VK4 478 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 SMG8Q8ND04 991 aaKnown RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 ETNPPLQ8TBG4 499 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 CCDC12Q8WUD4 166 aaPredicted RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 ZNF707Q96C28 371 aaPredicted RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 ACSF2Q96CM8 615 aaPredicted RBP9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 RMDN1Q96DB5 314 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 MBOAT7Q96N66 472 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 AIFM3Q96NN9 605 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 AGXT2Q9BYV1 514 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 CA14Q9ULX7 337 aa9.54□□□□□ -0.88
TGFBR3-208ENST00000529608 FAM186AA6NE01 2351 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 ZNF292O60281 2723 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 CYP3A7-CYP3A51PA0A087WV96 503 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 CCDC195A0A1B0GUA6 201 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 MED19A0JLT2 244 aaPredicted RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 ZBTB39O15060 712 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 SLC37A4O43826 429 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 LRRN2O75325 713 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 SOD2P04179 222 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 HMGB1P09429 215 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 GLULP15104 373 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 CYP3A7P24462 503 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 RAB27AP51159 221 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 BLOC1S2Q6QNY1 142 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 ERMP1Q7Z2K6 904 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 COLGALT2Q8IYK4 626 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 SLC44A3Q8N4M1 653 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 TMEM87AQ8NBN3 555 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 PRPF31Q8WWY3 499 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 TMEM143Q96AN5 459 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 RTP3Q9BQQ7 232 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 RPP25Q9BUL9 199 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 HERC2P3Q9BVR0 1158 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 EIF2AQ9BY44 585 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 RNF26Q9BY78 433 aaPredicted RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 RSAD1Q9HA92 442 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 WDR6Q9NNW5 1121 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 DLGAP2Q9P1A6 1054 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 FBXL21Q9UKT6 434 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 VAV3Q9UKW4 847 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 FAN1Q9Y2M0 1017 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 PRG3Q9Y2Y8 225 aaPredicted RBP9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 ZDHHC9Q9Y397 364 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 HES2Q9Y543 173 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 COL4A3BPQ9Y5P4 624 aa9.53□□□□□ -0.88
TGFBR3-208ENST00000529608 MIA3Q5JRA6 1907 aa9.52□□□□□ -0.88
TGFBR3-208ENST00000529608 CCDC196A0A1B0GTZ2 297 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 GOLGA6L3A6NEY3 463 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 INPPL1O15357 1258 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 ALDH2P05091 517 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 DCNP07585 359 aaKnown RBP9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 SKIP12755 728 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 IFNAR1P17181 557 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 PDIA3P30101 505 aaKnown RBP9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 GBP2P32456 591 aaPredicted RBP9.52□□□□□ -0.89
TGFBR3-208ENST00000529608 DNM2P50570 870 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms