RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TCF25Q9BQ70 676 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 PDCD2LQ9BRP1 358 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 SPEF1Q9Y4P9 236 aa6.19□□□□□ -1.42
CTR9-204ENST00000529355 PMS2P1A4D2B8 440 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 PRPF3O43395 683 aaKnown RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 ZNF623O75123 536 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 S100BP04271 92 aaPredicted RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 NPEPPSP55786 919 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 KRT85P78386 507 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 MEF2AQ02078 507 aaPredicted RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 UAP1L1Q3KQV9 507 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 CATIPQ7Z7H3 387 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 TPH2Q8IWU9 490 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 TRMT2AQ8IZ69 625 aaKnown RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 ZNF808Q8N4W9 903 aaPredicted RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 ZGPATQ8N5A5 531 aaKnown RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 ZNF512Q96ME7 567 aaPredicted RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 PUS7Q96PZ0 661 aaKnown RBP6.18□□□□□ -1.42
CTR9-204ENST00000529355 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 ZIM2Q9NZV7 527 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 EID1Q9Y6B2 187 aa6.18□□□□□ -1.42
CTR9-204ENST00000529355 K7ESM1 405 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 HOXA3O43365 443 aaPredicted RBP6.17□□□□□ -1.42
CTR9-204ENST00000529355 AMY1AP04745 511 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 PF4V1P10720 104 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
CTR9-204ENST00000529355 PTPN7P35236 360 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 MGAT2Q10469 447 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 PIN1Q13526 163 aaPredicted RBP6.17□□□□□ -1.42
CTR9-204ENST00000529355 PQLC1Q8N2U9 271 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
CTR9-204ENST00000529355 SLC35B2Q8TB61 432 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 CCHCR1Q8TD31 782 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 ZNF480Q8WV37 535 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 TSR2Q969E8 191 aaKnown RBP6.17□□□□□ -1.42
CTR9-204ENST00000529355 LSM14BQ9BX40 385 aaKnown RBP6.17□□□□□ -1.42
CTR9-204ENST00000529355 KCNH6Q9H252 994 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 NELFAQ9H3P2 528 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 ZBTB21Q9ULJ3 1066 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 SLC30A1Q9Y6M5 507 aa6.17□□□□□ -1.42
CTR9-204ENST00000529355 PLSCR1O15162 318 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 SYN1P17600 705 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 ACO1P21399 889 aaKnown RBP6.16□□□□□ -1.42
CTR9-204ENST00000529355 PCSK1P29120 753 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 ECHS1P30084 290 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 RPS19P39019 145 aaKnown RBP6.16□□□□□ -1.42
CTR9-204ENST00000529355 WNT3AP56704 352 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 APBA1Q02410 837 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 MRPL49Q13405 166 aaKnown RBP6.16□□□□□ -1.42
CTR9-204ENST00000529355 FKBP15Q5T1M5 1219 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 RHOT1Q8IXI2 618 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 D2HGDHQ8N465 521 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 OR7D4Q8NG98 312 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 JPH3Q8WXH2 748 aaPredicted RBP6.16□□□□□ -1.42
CTR9-204ENST00000529355 ARL8AQ96BM9 186 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 MYOCQ99972 504 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 CPEB1Q9BZB8 566 aaKnown RBP6.16□□□□□ -1.42
CTR9-204ENST00000529355 ZNF180Q9UJW8 692 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 NOB1Q9ULX3 412 aaKnown RBP6.16□□□□□ -1.42
CTR9-204ENST00000529355 PCDHB1Q9Y5F3 818 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 ATRNL1Q5VV63 1379 aa6.16□□□□□ -1.42
CTR9-204ENST00000529355 IL33O95760 270 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 GYPEP15421 78 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 GZMKP49863 264 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 TARDBPQ13148 414 aaKnown RBP eCLIP6.15□□□□□ -1.42
CTR9-204ENST00000529355 CDSNQ15517 529 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 TMEM240Q5SV17 173 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 C1QL3Q5VWW1 255 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 MAMDC4Q6UXC1 1216 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 Q6ZRM9 215 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 PALM2Q8IXS6 379 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 MB21D1Q8N884 522 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.15□□□□□ -1.42
CTR9-204ENST00000529355 PGBD4Q96DM1 585 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 HSPBAP1Q96EW2 488 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 IL17RAQ96F46 866 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 DMRTA2Q96SC8 542 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 BCO1Q9HAY6 547 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 AJAP1Q9UKB5 411 aaPredicted RBP6.15□□□□□ -1.42
CTR9-204ENST00000529355 ACTL7AQ9Y615 435 aa6.15□□□□□ -1.42
CTR9-204ENST00000529355 LRRC14BA6NHZ5 514 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 PHF2O75151 1096 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 SCGB1D2O95969 90 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 HK1P19367 917 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 COMTP21964 271 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 WASP42768 502 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 EPHB1P54762 984 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 ADKP55263 362 aaKnown RBP6.14□□□□□ -1.43
CTR9-204ENST00000529355 PER3P56645 1201 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 DSC2Q02487 901 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 ELAVL1Q15717 326 aaKnown RBP6.14□□□□□ -1.43
CTR9-204ENST00000529355 NFE2Q16621 373 aaPredicted RBP6.14□□□□□ -1.43
CTR9-204ENST00000529355 POLNQ7Z5Q5 900 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 SGMS1Q86VZ5 419 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 SSH1Q8WYL5 1049 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 SAMD11Q96NU1 681 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 ADOQ96SZ5 270 aa6.14□□□□□ -1.43
CTR9-204ENST00000529355 UHRF1Q96T88 793 aaPredicted RBP6.14□□□□□ -1.43
CTR9-204ENST00000529355 CDC5LQ99459 802 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms