RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NEK3P51956 506 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 OCRLQ01968 901 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 OVGP1Q12889 678 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 SESTD1Q86VW0 696 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 CFAP61Q8NHU2 1237 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 LNX1Q8TBB1 728 aaPredicted RBP13.34□□□□□ -0.27
TSKU-203ENST00000527881 ETNK2Q9NVF9 386 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 PHF24Q9UPV7 400 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
TSKU-203ENST00000527881 TTC4O95801 387 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 TMEM253P0C7T8 217 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 T-ENOLP0DO92 83 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 TROVE2P10155 538 aaKnown RBP eCLIP13.33□□□□□ -0.27
TSKU-203ENST00000527881 PCP11498 1178 aaKnown RBP13.33□□□□□ -0.27
TSKU-203ENST00000527881 VCAM1P19320 739 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 ABCD1P33897 745 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 RTP1P59025 263 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 CCDC62Q6P9F0 684 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 PRUNE1Q86TP1 453 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.27
TSKU-203ENST00000527881 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.27
TSKU-203ENST00000527881 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.27
TSKU-203ENST00000527881 JAG2Q9Y219 1238 aa13.33□□□□□ -0.27
TSKU-203ENST00000527881 TXNDC9O14530 226 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 CYTH3O43739 400 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 SLC37A4O43826 429 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 HAUS5O94927 633 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 HP1BP3Q5SSJ5 553 aaPredicted RBP13.33□□□□□ -0.28
TSKU-203ENST00000527881 SCFD1Q8WVM8 642 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 ART4Q93070 314 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 FAM161BQ96MY7 647 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 SYNCQ9H7C4 482 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 ANAPC5Q9UJX4 755 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 NIP7Q9Y221 180 aaKnown RBP eCLIP13.33□□□□□ -0.28
TSKU-203ENST00000527881 STARD13Q9Y3M8 1113 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 EXOC3O60645 756 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 EYA4O95677 639 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 PPP2R5CQ13362 524 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 SGO2Q562F6 1265 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 RNF207Q6ZRF8 634 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 ZNF444Q8N0Y2 327 aaPredicted RBP13.33□□□□□ -0.28
TSKU-203ENST00000527881 IFT43Q96FT9 208 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
TSKU-203ENST00000527881 DHX36Q9H2U1 1008 aaKnown RBP13.33□□□□□ -0.28
TSKU-203ENST00000527881 TAS2R14Q9NYV8 317 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 TMCO1Q9UM00 188 aa13.33□□□□□ -0.28
TSKU-203ENST00000527881 EXOC1LA0A1B0GW35 172 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 M0R2N6 131 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 ESRRAP11474 423 aaPredicted RBP13.32□□□□□ -0.28
TSKU-203ENST00000527881 PRKCIP41743 596 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 WDR4P57081 412 aaKnown RBP13.32□□□□□ -0.28
TSKU-203ENST00000527881 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
TSKU-203ENST00000527881 LIN52Q52LA3 116 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 BLOC1S6Q9UL45 172 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 A6NJR5 290 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 STARD3NLO95772 234 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 ATF2P15336 505 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 CPA2P48052 419 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 C6orf163Q5TEZ5 329 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 ZNF746Q6NUN9 644 aaPredicted RBP13.32□□□□□ -0.28
TSKU-203ENST00000527881 CCDC174Q6PII3 467 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 RIBC1Q8N443 379 aaPredicted RBP13.32□□□□□ -0.28
TSKU-203ENST00000527881 PCYOX1Q9UHG3 505 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 ANGPTL2Q9UKU9 493 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 GIT2Q14161 759 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 P3H1Q32P28 736 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 SPATA24Q86W54 205 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 DAGLBQ8NCG7 672 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 MPP4Q96JB8 637 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
TSKU-203ENST00000527881 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
TSKU-203ENST00000527881 MARF1Q9Y4F3 1742 aaKnown RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 MIF4GDA9UHW6 222 aaKnown RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 PYGMP11217 842 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 COMTP21964 271 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 ITGA8P53708 1063 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 AP1B1Q10567 949 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 TNFAIP8L3Q5GJ75 292 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 CYFIP1Q7L576 1253 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 DNAJC19Q96DA6 116 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 OLFM3Q96PB7 478 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 MIPEPQ99797 713 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
TSKU-203ENST00000527881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.284e-13■■■■■ 271.6
TSKU-203ENST00000527881 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 PLA2G4BP0C869 781 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 SOX5P35711 763 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 PGM1P36871 562 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 GRM4Q14833 912 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.31□□□□□ -0.282e-9■■■■□ 23.2
TSKU-203ENST00000527881 ATG4AQ8WYN0 398 aa13.31□□□□□ -0.28
TSKU-203ENST00000527881 FNBP1Q96RU3 617 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms