RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SLC18A3Q16572 532 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 ARL13BQ3SXY8 428 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 TYW5A2RUC4 315 aaKnown RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 MYBL1P10243 752 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 SHROOM1Q2M3G4 852 aaPredicted RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 TAB3Q8N5C8 712 aaPredicted RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 TC2NQ8N9U0 490 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 EPB41L5Q9HCM4 733 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 PDE11AQ9HCR9 933 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 SNX9Q9Y5X1 595 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 CCDC188H7C350 402 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 EML1O00423 815 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 ALDH3A1P30838 453 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 SCN4BQ8IWT1 228 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 CCNYQ8ND76 341 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 NUP85Q9BW27 656 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
USP47-207ENST00000527733 CYP3A7-CYP3A51PA0A087WV96 503 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 A6NNZ2 444 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 OGTO15294 1046 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 FGGP02679 453 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 GYPCP04921 128 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 CYP3A7P24462 503 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 IRX5P78411 483 aaPredicted RBP16.1■□□□□ 0.17
USP47-207ENST00000527733 TUBB8Q3ZCM7 444 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 SEMA6BQ9H3T3 888 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 A0A1W2PQJ5 194 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 EVI5O60447 810 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 STAMBPO95630 424 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 ITKQ08881 620 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 EP400NLQ6ZTU2 488 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP47-207ENST00000527733 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 CALCOCO1Q9P1Z2 691 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
USP47-207ENST00000527733 LRP6O75581 1613 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 CD4P01730 458 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 GARTP22102 1010 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 C2orf54Q08AI8 447 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 A0A087X0B3 334 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 RGS16O15492 202 aaPredicted RBP16.09■□□□□ 0.17
USP47-207ENST00000527733 SDC4P31431 198 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 SARSP49591 514 aaKnown RBP16.09■□□□□ 0.17
USP47-207ENST00000527733 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 BBS5Q8N3I7 341 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 RBM41Q96IZ5 413 aaKnown RBP16.09■□□□□ 0.17
USP47-207ENST00000527733 TMEM106CQ9BVX2 250 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 TOM1L1O75674 476 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 CLMNQ96JQ2 1002 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 NOP14P78316 857 aaKnown RBP16.09■□□□□ 0.17
USP47-207ENST00000527733 CEP85LQ5SZL2 805 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 NT5DC1Q5TFE4 455 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 CDR2LQ86X02 465 aaPredicted RBP16.09■□□□□ 0.17
USP47-207ENST00000527733 HAS1Q92839 578 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
USP47-207ENST00000527733 SAMD15Q9P1V8 674 aa16.09■□□□□ 0.17
USP47-207ENST00000527733 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.17
USP47-207ENST00000527733 ZBBXA8MT70 800 aa16.08■□□□□ 0.17
USP47-207ENST00000527733 TRAPPC3O43617 180 aa16.08■□□□□ 0.17
USP47-207ENST00000527733 ITGA4P13612 1032 aa16.08■□□□□ 0.17
USP47-207ENST00000527733 CCZ1BP86790 482 aa16.08■□□□□ 0.17
USP47-207ENST00000527733 CCZ1P86791 482 aaPredicted RBP16.08■□□□□ 0.17
USP47-207ENST00000527733 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.17
USP47-207ENST00000527733 RTN2O75298 545 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 MYBPC2Q14324 1141 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 AP1M1Q9BXS5 423 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 SLC38A7Q9NVC3 462 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 MAPTP10636 758 aaKnown RBP16.08■□□□□ 0.16
USP47-207ENST00000527733 STILQ15468 1287 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
USP47-207ENST00000527733 RBBP8NLQ8NC74 664 aaPredicted RBP16.08■□□□□ 0.16
USP47-207ENST00000527733 CCHCR1Q8TD31 782 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 MORC4Q8TE76 937 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 TRIM7Q9C029 511 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 UBIAD1Q9Y5Z9 338 aa16.08■□□□□ 0.16
USP47-207ENST00000527733 SPDYE5A6NIY4 337 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 KPNA6O60684 536 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 PPFIA4O75335 1185 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 PSMD10O75832 226 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 VIMP08670 466 aaKnown RBP16.07■□□□□ 0.16
USP47-207ENST00000527733 ADORA2BP29275 332 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 E2F4Q16254 413 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 DARS2Q6PI48 645 aaKnown RBP16.07■□□□□ 0.16
USP47-207ENST00000527733 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
USP47-207ENST00000527733 MICAL1Q8TDZ2 1067 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms