RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 HSD17B3P37058 310 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 TXKP42681 527 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 GALK1P51570 392 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 MAGOHP61326 146 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 HERVK_113P62684 666 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 TNNC1P63316 161 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 PTH1RQ03431 593 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 ACVR2BQ13705 512 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 TUBA3CQ13748 450 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 MORC3Q14149 939 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 EZH2Q15910 746 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 CFAP221Q4G0U5 840 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 ZCWPW2Q504Y3 356 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 EAPPQ56P03 285 aaPredicted RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 BEND3Q5T5X7 828 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 NT5DC1Q5TFE4 455 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 PCNX4Q63HM2 1172 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 RNF43Q68DV7 783 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 PDXDC1Q6P996 788 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 LRRC8BQ6P9F7 803 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 SPATA31D4Q6ZUB0 917 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 TMC4Q7Z404 712 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 PPP1R42Q7Z4L9 355 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 VPS36Q86VN1 386 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 DDX42Q86XP3 938 aaKnown RBP eCLIP6.22□□□□□ -1.41
CD44-225ENST00000527326 NELFCDQ8IXH7 590 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 RHOT2Q8IXI1 618 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 LRRC34Q8IZ02 419 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 TMCO5AQ8N6Q1 288 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 GAB3Q8WWW8 586 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 MAGOHBQ96A72 148 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 GRAMD1AQ96CP6 724 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 SNF8Q96H20 258 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 GPATCH3Q96I76 525 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 NSMCE3Q96MG7 304 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 GPR101Q96P66 508 aaPredicted RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 GSDMAQ96QA5 445 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 SRPK1Q96SB4 655 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 NUP88Q99567 741 aaPredicted RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 PRPF18Q99633 342 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 ELAC2Q9BQ52 826 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 UNKQ9C0B0 810 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 ISCUQ9H1K1 167 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 DPH5Q9H2P9 285 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 DHX36Q9H2U1 1008 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 PLGRKTQ9HBL7 147 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 PIH1D3Q9NQM4 214 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 STK32BQ9NY57 414 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 CHPF2Q9P2E5 772 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 ZNF212Q9UDV6 495 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 CNOT8Q9UFF9 292 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 SEC63Q9UGP8 760 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 LNPEPQ9UIQ6 1025 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 PNMA2Q9UL42 364 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 SPG7Q9UQ90 795 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 REXO2Q9Y3B8 237 aaKnown RBP6.22□□□□□ -1.41
CD44-225ENST00000527326 SNX9Q9Y5X1 595 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 DIP2AQ14689 1571 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 UMODL1Q5DID0 1318 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 A2ML1A8K2U0 1454 aa6.22□□□□□ -1.41
CD44-225ENST00000527326 DEPDC5O75140 1603 aa6.21□□□□□ -1.41
CD44-225ENST00000527326 N4BP2Q86UW6 1770 aaPredicted RBP6.21□□□□□ -1.41
CD44-225ENST00000527326 A0A088AWK7 358 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ARHGAP10A1A4S6 786 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SH3PXD2BA1X283 911 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 TRIM64CA6NLI5 447 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FAM47E-STBD1D6RA91 191 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PIK3R2O00459 728 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FBP2O00757 339 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 NDC80O14777 642 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 TEX28O15482 410 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 MARCH6O60337 910 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 LGR5O75473 907 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 EYA4O95677 639 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PROCP04070 461 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FAM153BP0C7A2 387 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 UBL4AP11441 157 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 HOXB4P17483 251 aaPredicted RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 ENPP1P22413 925 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PHBP35232 272 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 MMP13P45452 471 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ACADSBP45954 432 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 CARSP49589 748 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 MXI1P50539 228 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FXR1P51114 621 aaKnown RBP eCLIP6.21□□□□□ -1.42
CD44-225ENST00000527326 ARFIP2P53365 341 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PCBP4P57723 403 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 CYP4A11Q02928 519 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SLC34A1Q06495 639 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 STK3Q13188 491 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PNOCQ13519 176 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 LRP8Q14114 963 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SLC39A14Q15043 492 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PTPN21Q16825 1174 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SWI5Q1ZZU3 235 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ZNF423Q2M1K9 1284 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 KRT24Q2M2I5 525 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 KRT71Q3SY84 523 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FAM153CQ494X1 144 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms