RNA–Protein interactions for RNA: ENST00000526163.5

NXF1-203, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-203ENST00000526163 TRIM9Q9C026 710 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
NXF1-203ENST00000526163 PTPRHQ9HD43 1115 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 PANK4Q9NVE7 773 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 TBX20Q9UMR3 447 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 KIAA1671Q9BY89 1806 aa12.52□□□□□ -0.41
NXF1-203ENST00000526163 GOLGA6L4A6NEF3 574 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 RFXAPO00287 272 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 PIGRP01833 764 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 EDN1P05305 212 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MYL1P05976 194 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MCF2P10911 925 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 IDEP14735 1019 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 PFKFB1P16118 471 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 PROZP22891 400 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 KYAT1Q16773 422 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 ZNF568Q3ZCX4 644 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
NXF1-203ENST00000526163 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 KCNT2Q6UVM3 1135 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MPZL3Q6UWV2 235 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
NXF1-203ENST00000526163 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 GDPD5Q8WTR4 605 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
NXF1-203ENST00000526163 CCDC34Q96HJ3 373 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 CHAMP1Q96JM3 812 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 ZNF558Q96NG5 402 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MRPL44Q9H9J2 332 aaKnown RBP12.51□□□□□ -0.41
NXF1-203ENST00000526163 TBC1D13Q9NVG8 400 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 INPP5FQ9Y2H2 1132 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 HES2Q9Y543 173 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 MTCH2Q9Y6C9 303 aa12.51□□□□□ -0.41
NXF1-203ENST00000526163 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 PVALEFA0A1B0GWK0 134 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 CLDN3O15551 220 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 MLH1P40692 756 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 GRM5P41594 1212 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 SYKP43405 635 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 LIG4P49917 911 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 PLCB3Q01970 1234 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 KRT17Q04695 432 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 MAP4K3Q8IVH8 894 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 THNSL1Q8IYQ7 743 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 KLHL23Q8NBE8 558 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 MRPS27Q92552 414 aaKnown RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 BICD1Q96G01 975 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 GAD1Q99259 594 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 TMEM175Q9BSA9 504 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 CCDC94Q9BW85 323 aaPredicted RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 SPG21Q9NZD8 308 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 STK39Q9UEW8 545 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 PARP2Q9UGN5 583 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 PUF60Q9UHX1 559 aaKnown RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 EXOC7Q9UPT5 735 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 LZTS1Q9Y250 596 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 USP20Q9Y2K6 914 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
NXF1-203ENST00000526163 COL4A4P53420 1690 aaPredicted RBP12.5□□□□□ -0.41
NXF1-203ENST00000526163 ABLIM1O14639 778 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
NXF1-203ENST00000526163 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
NXF1-203ENST00000526163 NR1I2O75469 434 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 PPP1R37O75864 691 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 FGF18O76093 207 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 ALDH2P05091 517 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 ITGB1P05556 798 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 AKAP5P24588 427 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 NMT1P30419 496 aaKnown RBP12.49□□□□□ -0.41
NXF1-203ENST00000526163 NDUFA8P51970 172 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 YARSP54577 528 aaKnown RBP12.49□□□□□ -0.41
NXF1-203ENST00000526163 BCAR1P56945 870 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 ASIC1P78348 528 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 MCL1Q07820 350 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 GRIK3Q13003 919 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 NOLC1Q14978 699 aaKnown RBP eCLIP12.49□□□□□ -0.41
NXF1-203ENST00000526163 SLFN12LQ6IEE8 588 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 PDE12Q6L8Q7 609 aaKnown RBP12.49□□□□□ -0.41
NXF1-203ENST00000526163 FSIP1Q8NA03 581 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 SPPL3Q8TCT6 385 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 STAMQ92783 540 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 CDT1Q9H211 546 aa12.49□□□□□ -0.41
NXF1-203ENST00000526163 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms