RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 TARS2Q9BW92 718 aaKnown RBP16.58■□□□□ 0.24
SF3B2-202ENST00000524475 LMAN2LQ9H0V9 348 aa16.58■□□□□ 0.24
SF3B2-202ENST00000524475 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.24
SF3B2-202ENST00000524475 TYW1Q9NV66 732 aaKnown RBP16.58■□□□□ 0.24
SF3B2-202ENST00000524475 TBX20Q9UMR3 447 aa16.58■□□□□ 0.24
SF3B2-202ENST00000524475 LIG1P18858 919 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 NDUFA8P51970 172 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 MCL1Q07820 350 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 ADGRE1Q14246 886 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 HERC4Q5GLZ8 1057 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-202ENST00000524475 UNC13DQ70J99 1090 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 CDR2LQ86X02 465 aaPredicted RBP16.57■□□□□ 0.24
SF3B2-202ENST00000524475 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 TMEM87AQ8NBN3 555 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 CDT1Q9H211 546 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 CERS4Q9HA82 394 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 PANK4Q9NVE7 773 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 TBC1D13Q9NVG8 400 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 PCDHB12Q9Y5F1 795 aa16.57■□□□□ 0.24
SF3B2-202ENST00000524475 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
SF3B2-202ENST00000524475 PVALEFA0A1B0GWK0 134 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 ARL5CA6NH57 179 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 SLC34A2O95436 690 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 IDEP14735 1019 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 FOSL2P15408 326 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 NMT1P30419 496 aaKnown RBP16.56■□□□□ 0.24
SF3B2-202ENST00000524475 PPM1AP35813 382 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 GRM5P41594 1212 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 UBE3AQ05086 875 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 EHHADHQ08426 723 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 COASYQ13057 564 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 NOLC1Q14978 699 aaKnown RBP eCLIP16.56■□□□□ 0.24
SF3B2-202ENST00000524475 ZNF568Q3ZCX4 644 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 LONRF3Q496Y0 759 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 MRPL44Q9H9J2 332 aaKnown RBP16.56■□□□□ 0.24
SF3B2-202ENST00000524475 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 HES2Q9Y543 173 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 PCDHB13Q9Y5F0 798 aa16.56■□□□□ 0.24
SF3B2-202ENST00000524475 TDRD15B5MCY1 1934 aaKnown RBP16.56■□□□□ 0.24
SF3B2-202ENST00000524475 PRRC2BQ5JSZ5 2229 aaKnown RBP16.55■□□□□ 0.24
SF3B2-202ENST00000524475 CITO14578 2027 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
SF3B2-202ENST00000524475 ASIC1P78348 528 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 PLCB3Q01970 1234 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 GPM6BQ13491 265 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 KCNT2Q6UVM3 1135 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 GSTCDQ8NEC7 633 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 STAMQ92783 540 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 ZNF558Q96NG5 402 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
SF3B2-202ENST00000524475 GAD1Q99259 594 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 TMEM175Q9BSA9 504 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 GOLPH3LQ9H4A5 285 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 LZTS1Q9Y250 596 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 STYXL1Q9Y6J8 313 aa16.55■□□□□ 0.24
SF3B2-202ENST00000524475 REV3LO60673 3130 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 PRUNE2Q8WUY3 3088 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 HNRNPDLO14979 420 aaKnown RBP16.54■□□□□ 0.24
SF3B2-202ENST00000524475 CLDN3O15551 220 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 RECQL4O94761 1208 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 MLH1P40692 756 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 LIG4P49917 911 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 DSC1Q08554 894 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 GRIK3Q13003 919 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 KYAT1Q16773 422 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 PTPROQ16827 1216 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 XKR4Q5GH76 650 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
SF3B2-202ENST00000524475 L1TD1Q5T7N2 865 aaKnown RBP16.54■□□□□ 0.24
SF3B2-202ENST00000524475 KRBA2Q6ZNG9 492 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 CLEC17AQ6ZS10 378 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 STXBP4Q6ZWJ1 553 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 MRPL38Q96DV4 380 aaKnown RBP16.54■□□□□ 0.24
SF3B2-202ENST00000524475 BICD1Q96G01 975 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 CCDC94Q9BW85 323 aaPredicted RBP16.54■□□□□ 0.24
SF3B2-202ENST00000524475 NRDE2Q9H7Z3 1164 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 TOPORSQ9NS56 1045 aaPredicted RBP16.54■□□□□ 0.24
SF3B2-202ENST00000524475 SNTG2Q9NY99 539 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 HCSTQ9UBK5 93 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 STK39Q9UEW8 545 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 PLAGL2Q9UPG8 496 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 EXOC7Q9UPT5 735 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 INPP5FQ9Y2H2 1132 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 MTCH2Q9Y6C9 303 aa16.54■□□□□ 0.24
SF3B2-202ENST00000524475 UBE4BO95155 1302 aa16.53■□□□□ 0.24
SF3B2-202ENST00000524475 PLXNA4Q9HCM2 1894 aa16.53■□□□□ 0.24
SF3B2-202ENST00000524475 RFXAPO00287 272 aa16.53■□□□□ 0.24
SF3B2-202ENST00000524475 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
SF3B2-202ENST00000524475 ZNF202O95125 648 aa16.53■□□□□ 0.24
SF3B2-202ENST00000524475 GCNT3O95395 438 aa16.53■□□□□ 0.24
SF3B2-202ENST00000524475 AKAP5P24588 427 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms