RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 INPPL1O15357 1258 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 TOM1L1O75674 476 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 PFKFB1P16118 471 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 PPM1AP35813 382 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 MPZL3Q6UWV2 235 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 CCDC65Q8IXS2 484 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 CEP57L1Q8IYX8 460 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 KLHL23Q8NBE8 558 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 BICD1Q96G01 975 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 FIZ1Q96SL8 496 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 GAD1Q99259 594 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 TCHPQ9BT92 498 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 ST6GALNAC4Q9H4F1 302 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 GDPD2Q9HCC8 539 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 PTPRHQ9HD43 1115 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 TBX20Q9UMR3 447 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 PLAGL2Q9UPG8 496 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 TCHHQ07283 1943 aa13.74□□□□□ -0.21
CCNC-216ENST00000523961 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 FRMD3A2A2Y4 597 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 ITGB1P05556 798 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 SLFN14P0C7P3 912 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 MCF2P10911 925 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 PROZP22891 400 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 AKAP5P24588 427 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 NMT1P30419 496 aaKnown RBP13.73□□□□□ -0.21
CCNC-216ENST00000523961 MLH1P40692 756 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 ALDH7A1P49419 539 aaKnown RBP13.73□□□□□ -0.21
CCNC-216ENST00000523961 GTF2BQ00403 316 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
CCNC-216ENST00000523961 CNNM4Q6P4Q7 775 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 ZNF720Q7Z2F6 126 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 HVCN1Q96D96 273 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
CCNC-216ENST00000523961 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
CCNC-216ENST00000523961 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 C7orf25Q9BPX7 421 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 CDT1Q9H211 546 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 NRDE2Q9H7Z3 1164 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
CCNC-216ENST00000523961 OLFML3Q9NRN5 406 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 SNTG2Q9NY99 539 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 CHMP5Q9NZZ3 219 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 HPSEQ9Y251 543 aa13.73□□□□□ -0.21
CCNC-216ENST00000523961 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 ABLIM1O14639 778 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 GRM6O15303 877 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 CLDN3O15551 220 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCNC-216ENST00000523961 FGF18O76093 207 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 RECQL4O94761 1208 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 POMCP01189 267 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 PIGRP01833 764 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 GRM5P41594 1212 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 SYKP43405 635 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 LIG4P49917 911 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 SCNN1GP51170 649 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 AFF1P51825 1210 aaKnown RBP13.72□□□□□ -0.21
CCNC-216ENST00000523961 BCAR1P56945 870 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 ASIC1P78348 528 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 UBE3AQ05086 875 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 ALCAMQ13740 583 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 ZBTB33Q86T24 672 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 MAP4K3Q8IVH8 894 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 FSIP1Q8NA03 581 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 SPPL3Q8TCT6 385 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
CCNC-216ENST00000523961 ZFP42Q96MM3 310 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 CCDC94Q9BW85 323 aaPredicted RBP13.72□□□□□ -0.21
CCNC-216ENST00000523961 GBP3Q9H0R5 595 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 ALG13Q9NP73 1137 aaKnown RBP13.72□□□□□ -0.21
CCNC-216ENST00000523961 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 SERTAD1Q9UHV2 236 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 GDAQ9Y2T3 454 aa13.72□□□□□ -0.21
CCNC-216ENST00000523961 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
CCNC-216ENST00000523961 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.21
CCNC-216ENST00000523961 HNRNPDLO14979 420 aaKnown RBP13.71□□□□□ -0.21
CCNC-216ENST00000523961 ACTN4O43707 911 aaKnown RBP13.71□□□□□ -0.21
CCNC-216ENST00000523961 MATR3P43243 847 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCNC-216ENST00000523961 AFMP43652 599 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 NDUFA8P51970 172 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.21
CCNC-216ENST00000523961 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 KRT17Q04695 432 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 MCL1Q07820 350 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 GRIK3Q13003 919 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 COASYQ13057 564 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 NOLC1Q14978 699 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCNC-216ENST00000523961 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.21
CCNC-216ENST00000523961 ZC2HC1CQ53FD0 456 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms