RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 EEF1DP3Q658K8 133 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 CDR2LQ86X02 465 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MAP4K3Q8IVH8 894 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 COLGALT1Q8NBJ5 622 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MRPS27Q92552 414 aaKnown RBP13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MRPL38Q96DV4 380 aaKnown RBP13.77□□□□□ -0.21
VEGFA-225ENST00000523950 ZNF558Q96NG5 402 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 TARS2Q9BW92 718 aaKnown RBP13.77□□□□□ -0.21
VEGFA-225ENST00000523950 PANK4Q9NVE7 773 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 TBC1D13Q9NVG8 400 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 CHMP5Q9NZZ3 219 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 HES2Q9Y543 173 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 MTCH2Q9Y6C9 303 aa13.77□□□□□ -0.21
VEGFA-225ENST00000523950 PLXNA4Q9HCM2 1894 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 A0A1B0GVL5 298 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 RFXAPO00287 272 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 PPP1R37O75864 691 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 SLFN14P0C7P3 912 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 IDEP14735 1019 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 MLH1P40692 756 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 GRM5P41594 1212 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 SYKP43405 635 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 RNASELQ05823 741 aaKnown RBP13.76□□□□□ -0.21
VEGFA-225ENST00000523950 GRIK3Q13003 919 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 KYAT1Q16773 422 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 TIGD5Q53EQ6 642 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 HERC4Q5GLZ8 1057 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-225ENST00000523950 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 ZNF720Q7Z2F6 126 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 KLHL23Q8NBE8 558 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 MAFAQ8NHW3 353 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-225ENST00000523950 BICD1Q96G01 975 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 CHAMP1Q96JM3 812 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 FAM193BQ96PV7 902 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-225ENST00000523950 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 GAD1Q99259 594 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 TCHPQ9BT92 498 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 CCDC94Q9BW85 323 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-225ENST00000523950 CDT1Q9H211 546 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 MRPL44Q9H9J2 332 aaKnown RBP13.76□□□□□ -0.21
VEGFA-225ENST00000523950 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 PLAGL2Q9UPG8 496 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
VEGFA-225ENST00000523950 CITO14578 2027 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 ARL5CA6NH57 179 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 ABLIM1O14639 778 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 CLDN3O15551 220 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 ACTN4O43707 911 aaKnown RBP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 RECQL4O94761 1208 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 NMT1P30419 496 aaKnown RBP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 ALDH7A1P49419 539 aaKnown RBP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 LIG4P49917 911 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 BCAR1P56945 870 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 ASIC1P78348 528 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 MCL1Q07820 350 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 NOLC1Q14978 699 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 PDE12Q6L8Q7 609 aaKnown RBP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 UNC13DQ70J99 1090 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 SLC39A11Q8N1S5 342 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 FSIP1Q8NA03 581 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 STRA6Q9BX79 667 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 NRDE2Q9H7Z3 1164 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 GDPD2Q9HCC8 539 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 TOPORSQ9NS56 1045 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-225ENST00000523950 SNTG2Q9NY99 539 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 PARP2Q9UGN5 583 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 EXOC7Q9UPT5 735 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 USP20Q9Y2K6 914 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 CHD9Q3L8U1 2897 aa13.75□□□□□ -0.21
VEGFA-225ENST00000523950 ATG2AQ2TAZ0 1938 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
VEGFA-225ENST00000523950 NR1I2O75469 434 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 FGF18O76093 207 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 GCNT3O95395 438 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 POMCP01189 267 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 ITGB1P05556 798 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 AKAP5P24588 427 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
VEGFA-225ENST00000523950 KRT17Q04695 432 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 DSC1Q08554 894 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 COASYQ13057 564 aa13.74□□□□□ -0.21
VEGFA-225ENST00000523950 SLFN12LQ6IEE8 588 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms