RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 CABP7Q86V35 215 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 LRRC43Q8N309 656 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 C17orf53Q8N3J3 647 aaPredicted RBP7.48□□□□□ -1.21
SPIDR-218ENST00000522222 KRI1Q8N9T8 703 aaKnown RBP7.48□□□□□ -1.21
SPIDR-218ENST00000522222 ZNF397Q8NF99 534 aaPredicted RBP7.48□□□□□ -1.21
SPIDR-218ENST00000522222 LRRC15Q8TF66 581 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 CLP1Q92989 425 aaKnown RBP7.48□□□□□ -1.21
SPIDR-218ENST00000522222 CPB2Q96IY4 423 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 AK8Q96MA6 479 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 PLIN2Q99541 437 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 KIFC3Q9BVG8 833 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 NFKBIZQ9BYH8 718 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 TMEM117Q9H0C3 514 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 ELAC1Q9H777 363 aaKnown RBP7.48□□□□□ -1.21
SPIDR-218ENST00000522222 CHST12Q9NRB3 414 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 FAM105AQ9NUU6 356 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 FBXO2Q9UK22 296 aaPredicted RBP7.48□□□□□ -1.21
SPIDR-218ENST00000522222 DNM3Q9UQ16 869 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 RWDD3Q9Y3V2 267 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 MTCH2Q9Y6C9 303 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 PHLPP2Q6ZVD8 1323 aa7.48□□□□□ -1.21
SPIDR-218ENST00000522222 MEIS3P2A8K0S8 358 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 C5orf67F2Z3F1 127 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 H3BNC9 293 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 HOXA2O43364 376 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 SLC26A4O43511 780 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 HIP1RO75146 1068 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CSPG5O95196 566 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 SSBP05455 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 C7P10643 843 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 PLCG1P19174 1290 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 POU3F3P20264 500 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 HOXA11P31270 313 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 LONP1P36776 959 aaKnown RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 BMPR1AP36894 532 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 NAMPTP43490 491 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 RAB27AP51159 221 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 TUBB4BP68371 445 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 POU5F1BQ06416 359 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 GABPB1Q06547 395 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 NCBP1Q09161 790 aaKnown RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 MAPK7Q13164 816 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 GPM6BQ13491 265 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 KARSQ15046 597 aaKnown RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CCDC85BQ15834 202 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 LONRF3Q496Y0 759 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 NOTUMQ6P988 496 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 ZBTB8OSQ8IWT0 167 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 DAW1Q8N136 415 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 RASSF8Q8NHQ8 419 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 DEPTORQ8TB45 409 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 HELQQ8TDG4 1101 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 PPM1EQ8WY54 764 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 KIFAP3Q92845 792 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 LPPQ93052 612 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CCDC51Q96ER9 411 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CASD1Q96PB1 797 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 C11orf84Q9BUA3 381 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 TRAIPQ9BWF2 469 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 NT5C3AQ9H0P0 336 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CSRNP2Q9H175 543 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 POLD4Q9HCU8 107 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 PRDM6Q9NQX0 595 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 ARGLU1Q9NWB6 273 aaPredicted RBP7.47□□□□□ -1.21
SPIDR-218ENST00000522222 PCDHB2Q9Y5E7 798 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 CNTNAP2Q9UHC6 1331 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 TRANK1O15050 2925 aa7.47□□□□□ -1.21
SPIDR-218ENST00000522222 BRWD1Q9NSI6 2320 aa7.46□□□□□ -1.21
SPIDR-218ENST00000522222 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.21
SPIDR-218ENST00000522222 MYO7AQ13402 2215 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 TTLL13PA6NNM8 815 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 GRM6O15303 877 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 ARHGAP6O43182 974 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 KIF20AO95235 890 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 EOMESO95936 686 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SERPINC1P01008 464 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 EDN1P05305 212 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PRKCBP05771 671 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 RB1P06400 928 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PLA2G4BP0C869 781 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SKIP12755 728 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 ARF4P18085 180 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 LAG3P18627 525 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 GUCY2CP25092 1073 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 AXLP30530 894 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PBX3P40426 434 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 UBA7P41226 1012 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 SLC12A3P55017 1021 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 FANCCQ00597 558 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 DMP1Q13316 513 aaPredicted RBP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PPP2R5AQ15172 486 aa7.46□□□□□ -1.22
SPIDR-218ENST00000522222 PCBP1Q15365 356 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPIDR-218ENST00000522222 DPCR1Q3MIW9 517 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms