RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	TFF2	Q03403	129 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GIT2	Q14161	759 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DCAF4L1	Q3SXM0	396 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NAALADL2	Q58DX5	795 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SHC4	Q6S5L8	630 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SV2B	Q7L1I2	683 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	RBM23	Q86U06	439 aa	Known RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TMEM173	Q86WV6	379 aa	Predicted RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SFR1	Q86XK3	245 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZNF280B	Q86YH2	543 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SLC39A11	Q8N1S5	342 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CEP120	Q8N960	986 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TMEM161B	Q8NDZ6	487 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	DDX12P	Q92771	950 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TMEM169	Q96HH4	297 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SPATA32	Q96LK8	384 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TCHP	Q9BT92	498 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MRPL4	Q9BYD3	311 aa	Known RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CDT1	Q9H211	546 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TMEM134	Q9H6X4	195 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	C17orf75	Q9HAS0	396 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PARVG	Q9HBI0	331 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TLR9	Q9NR96	1032 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MIOS	Q9NXC5	875 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SPG21	Q9NZD8	308 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TBC1D7	Q9P0N9	293 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CACNG4	Q9UBN1	327 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CFAP45	Q9UL16	551 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PCDHA7	Q9UN72	937 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PRG3	Q9Y2Y8	225 aa	Predicted RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	RBM19	Q9Y4C8	960 aa	Known RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MORC2	Q9Y6X9	1032 aa	Predicted RBP	9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	REV3L	O60673	3130 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TRIP11	Q15643	1979 aa		9.19	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TRANK1	O15050	2925 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MYMK	A6NI61	221 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CIT	O14578	2027 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TRAK2	O60296	914 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MAPT	P10636	758 aa	Known RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NMT1	P30419	496 aa	Known RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GTF2F1	P35269	517 aa	Known RBP eCLIP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NCKAP1L	P55160	1127 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KRT17	Q04695	432 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CAMK1	Q14012	370 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CSPP1	Q1MSJ5	1256 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SEZ6	Q53EL9	994 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GLRA4	Q5JXX5	417 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	HAUS6	Q7Z4H7	955 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FAM178B	Q8IXR5	827 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	BCL7C	Q8WUZ0	217 aa	Predicted RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	SPIRE2	Q8WWL2	714 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MRPS27	Q92552	414 aa	Known RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	RABGGTA	Q92696	567 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZBTB45	Q96K62	511 aa	Predicted RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ACO2	Q99798	780 aa	Known RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TCF25	Q9BQ70	676 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GDPD2	Q9HCC8	539 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	UBN1	Q9NPG3	1134 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CLDND1	Q9NY35	253 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FAM13B	Q9NYF5	915 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PUF60	Q9UHX1	559 aa	Known RBP	9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GIT1	Q9Y2X7	761 aa		9.18	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TCF20	Q9UGU0	1960 aa	Known RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CASTOR2	A6NHX0	329 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941		F8W810	466 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941		H0YCG3	227 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TULP1	O00294	542 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NRP1	O14786	923 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	HNRNPDL	O14979	420 aa	Known RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PER2	O15055	1255 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	POLR2D	O15514	142 aa	Known RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	LINC01565	O15544	149 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GALT	P07902	379 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KCNA5	P22460	613 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NRIP1	P48552	1158 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	LIG4	P49917	911 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KCNQ1	P51787	676 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ERVFC1	P60507	584 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	UBE3A	Q05086	875 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	HYAL1	Q12794	435 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	GRIK3	Q13003	919 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	NOLC1	Q14978	699 aa	Known RBP eCLIP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CLUL1	Q15846	466 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	AXDND1	Q5T1B0	1012 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	ATL3	Q6DD88	541 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	MPZL3	Q6UWV2	235 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TMC7	Q7Z402	723 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	HASPIN	Q8TF76	798 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	LEO1	Q8WVC0	666 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	AUTS2	Q8WXX7	1259 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	HLA-C	Q95604	372 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	PPP2R3C	Q969Q6	453 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CCDC94	Q9BW85	323 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	CXCL16	Q9H2A7	254 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	UBE2Z	Q9H832	354 aa	Predicted RBP	9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	KANSL3	Q9P2N6	904 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	TNFSF13B	Q9Y275	285 aa		9.17	□□□□□ -0.94
CTNNA1-231	ENST00000521941	FAN1	Q9Y2M0	1017 aa		9.17	□□□□□ -0.94

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