RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TRIM16O95361 564 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 CAVIN2O95810 425 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 GLUD1P00367 558 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 RPLP2P05387 115 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 GOLGA8HP0CJ92 632 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 HOXA13P31271 388 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 PTH1RQ03431 593 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 CFHR1Q03591 330 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 CDC37Q16543 378 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 UAP1L1Q3KQV9 507 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 LILRA6Q6PI73 481 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 CWC27Q6UX04 472 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 ZNF280BQ86YH2 543 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 KIAA0319LQ8IZA0 1049 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 IFNL3Q8IZI9 196 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 ABI1Q8IZP0 508 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 NME8Q8N427 588 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 EVI5LQ96CN4 794 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 GPATCH3Q96I76 525 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 RPS6KC1Q96S38 1066 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 RXFP1Q9HBX9 757 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 ERAP1Q9NZ08 941 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 TSR3Q9UJK0 312 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 TSPY2A6NKD2 308 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 C2CD2LO14523 706 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 MEFVO15553 781 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 TRAK2O60296 914 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 EFEMP2O95967 443 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 CCR10P46092 362 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 TDO2P48775 406 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 IRX4P78413 519 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 TANGO2Q6ICL3 276 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 RNF169Q8NCN4 708 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 HDAC7Q8WUI4 952 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 RUFY2Q8WXA3 655 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 MRPL17Q9NRX2 175 aaKnown RBP8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 DIAPH3Q9NSV4 1193 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 ZDHHC7Q9NXF8 308 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 RTEL1Q9NZ71 1219 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 DKK4Q9UBT3 224 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 PCDHA1Q9Y5I3 950 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 SNX14Q9Y5W7 946 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 ABCA7Q8IZY2 2146 aa8.29□□□□□ -1.08
CTNNA1-227ENST00000521387 EML5Q05BV3 1969 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 TGM5O43548 720 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 GAS2O43903 313 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 EXTL3O43909 919 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 ATP9AO75110 1047 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 ECI2O75521 394 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 ZMYND10O75800 440 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 ITPKBP27987 946 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 CCND2P30279 289 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 MCM2P49736 904 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 AK2P54819 239 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 CREB5Q02930 508 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 PPARAQ07869 468 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 SEMA3BQ13214 749 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 NMIQ13287 307 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 CUL4AQ13619 759 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 QRICH1Q2TAL8 776 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 MTHFD1LQ6UB35 978 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 PALB2Q86YC2 1186 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 MAP4K3Q8IVH8 894 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 SCUBE3Q8IX30 993 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 NPAS3Q8IXF0 933 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 FAM181AQ8N9Y4 354 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 PIP4K2CQ8TBX8 421 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 KCNB2Q92953 911 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 TMX3Q96JJ7 454 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 FAM227BQ96M60 508 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 PPP1R16BQ96T49 567 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 OSMRQ99650 979 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 MRPL11Q9Y3B7 192 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-227ENST00000521387 MTCL1Q9Y4B5 1905 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 A0A0U1RQF3 1178 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 MEIS3P2A8K0S8 358 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 B4E1Z4 1266 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 PATL2C9JE40 543 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 M0R2C6 588 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 DCLK1O15075 740 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 GPAA1O43292 621 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 PPP1R11O60927 126 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 GPR32O75388 356 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 BAG4O95429 457 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 ADH1AP07327 375 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 ATP5JP18859 108 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 FCARP24071 287 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 CCNE1P24864 410 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 CTDSPL2Q05D32 466 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 PKP1Q13835 747 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 KIZQ2M2Z5 673 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 CLEC17AQ6ZS10 378 aa8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 RNF168Q8IYW5 571 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-227ENST00000521387 ADGRF4Q8IZF3 695 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms