RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 AURKAIP1Q9NWT8 199 aaPredicted RBP7.16□□□□□ -1.26
SCARNA1-201ENST00000517138 MCM8Q9UJA3 840 aa7.16□□□□□ -1.26
SCARNA1-201ENST00000517138 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
SCARNA1-201ENST00000517138 FZD7O75084 574 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 RPS6KA4O75676 772 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 ZNF202O95125 648 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 NR4A1P22736 598 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 KLF1Q13351 362 aaPredicted RBP7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 TUBA3CQ13748 450 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 RNF187Q5TA31 235 aaPredicted RBP7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 TUBA3EQ6PEY2 450 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 GPRIN1Q7Z2K8 1008 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 FAM83AQ86UY5 434 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 SYT12Q8IV01 421 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 SLC35B2Q8TB61 432 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 ZNF480Q8WV37 535 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 KCNH6Q9H252 994 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 MMRN2Q9H8L6 949 aa7.15□□□□□ -1.26
SCARNA1-201ENST00000517138 LEFTY2O00292 366 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 CDK11BP21127 795 aaKnown RBP7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 FAPQ12884 760 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 FAM50AQ14320 339 aaKnown RBP7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 SEPT2Q15019 361 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 INAVAQ3KP66 663 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 RABL3Q5HYI8 236 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 DOK3Q7L591 496 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 TRMT2AQ8IZ69 625 aaKnown RBP7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 RNF169Q8NCN4 708 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 OR2I1PQ8NGU4 316 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 HOXB13Q92826 284 aaPredicted RBP7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 FATE1Q969F0 183 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 ZNF768Q9H5H4 540 aaKnown RBP7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 LDAHQ9H6V9 325 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 PARPBPQ9NWS1 579 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 GPRC5BQ9NZH0 403 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 SORCS3Q9UPU3 1222 aa7.14□□□□□ -1.27
SCARNA1-201ENST00000517138 WASHC2AQ641Q2 1341 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 GOLGA6L6A8MZA4 724 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 KATNA1O75449 491 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 MT-CO1P00395 513 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 MTHFD2P13995 350 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 ZFP36P26651 326 aaKnown RBP7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 APOBEC3AP31941 199 aaPredicted RBP7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 MCAMP43121 646 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 MTMR1Q13613 665 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 NOMO1Q15155 1222 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 VPS72Q15906 364 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 DCAF17Q5H9S7 520 aaPredicted RBP7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 STON2Q8WXE9 905 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 PDCD2LQ9BRP1 358 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 GREM2Q9H772 168 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 SPON1Q9HCB6 807 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 GPR45Q9Y5Y3 372 aa7.13□□□□□ -1.27
SCARNA1-201ENST00000517138 ATRNL1Q5VV63 1379 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 AGXTP21549 392 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 CRHR1P34998 444 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 PTPN7P35236 360 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 SREBF1P36956 1147 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 GDF5P43026 501 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 FAM189BP81408 668 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 MALLQ13021 153 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 ABCB5Q2M3G0 1257 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 MUM1L1Q5H9M0 696 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 MBNL2Q5VZF2 373 aaKnown RBP7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 PPM1NQ8N819 430 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 PRPF38AQ8NAV1 312 aaKnown RBP7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 TEX101Q9BY14 249 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 PUS7LQ9H0K6 701 aaKnown RBP7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 PCED1AQ9H1Q7 454 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 RBM12Q9NTZ6 932 aaKnown RBP7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 TRHDEQ9UKU6 1024 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 HDAC5Q9UQL6 1122 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 SIK3Q9Y2K2 1263 aa7.12□□□□□ -1.27
SCARNA1-201ENST00000517138 AHRRA9YTQ3 701 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PHF2O75151 1096 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 GASTP01350 101 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 GSPT1P15170 499 aaKnown RBP7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 SLC6A9P48067 706 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 GUCY2FP51841 1108 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 NECAB2Q7Z6G3 386 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 C1orf162Q8NEQ5 155 aaPredicted RBP7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 OR7D4Q8NG98 312 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 CPT1CQ8TCG5 803 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 DPF2Q92785 391 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 CLIP3Q96DZ5 547 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 TMX1Q9H3N1 280 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 ZNF277Q9NRM2 450 aaPredicted RBP7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 REXO2Q9Y3B8 237 aaKnown RBP7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PCDHGA9Q9Y5G4 932 aaKnown RBP7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PCDHGA8Q9Y5G5 932 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PCDHGA7Q9Y5G6 932 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PCDHGA3Q9Y5H0 932 aa7.11□□□□□ -1.27
SCARNA1-201ENST00000517138 PNPLA7Q6ZV29 1317 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 TBKBP1A7MCY6 615 aa7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 CXorf49A8MYA2 514 aaPredicted RBP7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
SCARNA1-201ENST00000517138 HSP90B1P14625 803 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms