RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CITO14578 2027 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 CA3P07451 260 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 MCL1Q07820 350 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 PNOCQ13519 176 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 BTG3Q14201 252 aaPredicted RBP13.03□□□□□ -0.32
SNF8-215ENST00000515572 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNF8-215ENST00000515572 EPM2AIP1Q7L775 607 aaPredicted RBP13.03□□□□□ -0.32
SNF8-215ENST00000515572 SYCP3Q8IZU3 236 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 ZNF507Q8TCN5 953 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
SNF8-215ENST00000515572 FGFBP2Q9BYJ0 223 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 CDT1Q9H211 546 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
SNF8-215ENST00000515572 RSAD1Q9HA92 442 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
SNF8-215ENST00000515572 GIT1Q9Y2X7 761 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
SNF8-215ENST00000515572 A0A0B4J269 797 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 TBKBP1A7MCY6 615 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 SOX1O00570 391 aaPredicted RBP13.02□□□□□ -0.33
SNF8-215ENST00000515572 ABLIM1O14639 778 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 INPPL1O15357 1258 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 KIF20AO95235 890 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 MYOGP15173 224 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 GRM5P41594 1212 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNF8-215ENST00000515572 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 AGMOQ6ZNB7 445 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 LRRC43Q8N309 656 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 FIBCD1Q8N539 461 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 SPATA20Q8TB22 786 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 URGCPQ8TCY9 931 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 LPPQ93052 612 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
SNF8-215ENST00000515572 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 TOPORSQ9NS56 1045 aaPredicted RBP13.02□□□□□ -0.33
SNF8-215ENST00000515572 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 HES2Q9Y543 173 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 STYXL1Q9Y6J8 313 aa13.02□□□□□ -0.33
SNF8-215ENST00000515572 RANBP2P49792 3224 aaKnown RBP13.02□□□□□ -0.33
SNF8-215ENST00000515572 LCHNA4D1U4 455 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 CARNS1A5YM72 827 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 KIAA0391O15091 583 aaKnown RBP13.01□□□□□ -0.33
SNF8-215ENST00000515572 OFD1O75665 1012 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
SNF8-215ENST00000515572 MBD3O95983 291 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
SNF8-215ENST00000515572 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
SNF8-215ENST00000515572 KCNA1Q09470 495 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 STK4Q13043 487 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 SLC39A4Q6P5W5 647 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 KIAA0895Q8NCT3 520 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 GLIS3Q8NEA6 775 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 MSTO1Q9BUK6 570 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 APOL6Q9BWW8 343 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 GBP3Q9H0R5 595 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
SNF8-215ENST00000515572 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 PDCD11Q14690 1871 aaKnown RBP13.01□□□□□ -0.33
SNF8-215ENST00000515572 TRIP11Q15643 1979 aa13.01□□□□□ -0.33
SNF8-215ENST00000515572 ARL5CA6NH57 179 aa13□□□□□ -0.33
SNF8-215ENST00000515572 MEIS3P2A8K0S8 358 aa13□□□□□ -0.33
SNF8-215ENST00000515572 OGTO15294 1046 aa13□□□□□ -0.33
SNF8-215ENST00000515572 RECQL4O94761 1208 aa13□□□□□ -0.33
SNF8-215ENST00000515572 HARSP12081 509 aaKnown RBP13□□□□□ -0.33
SNF8-215ENST00000515572 GARTP22102 1010 aa13□□□□□ -0.33
SNF8-215ENST00000515572 AKAP5P24588 427 aa13□□□□□ -0.33
SNF8-215ENST00000515572 MLH1P40692 756 aa13□□□□□ -0.33
SNF8-215ENST00000515572 GATMP50440 423 aa13□□□□□ -0.33
SNF8-215ENST00000515572 FXR1P51114 621 aaKnown RBP eCLIP13□□□□□ -0.33
SNF8-215ENST00000515572 TAP1Q03518 808 aa13□□□□□ -0.33
SNF8-215ENST00000515572 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
SNF8-215ENST00000515572 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
SNF8-215ENST00000515572 PAN2Q504Q3 1202 aaKnown RBP13□□□□□ -0.33
SNF8-215ENST00000515572 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
SNF8-215ENST00000515572 ZNF658Q5TYW1 1059 aaPredicted RBP13□□□□□ -0.33
SNF8-215ENST00000515572 GOLGA5Q8TBA6 731 aa13□□□□□ -0.33
SNF8-215ENST00000515572 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
SNF8-215ENST00000515572 CLP1Q92989 425 aaKnown RBP13□□□□□ -0.33
SNF8-215ENST00000515572 LRCH3Q96II8 777 aa13□□□□□ -0.33
SNF8-215ENST00000515572 ZBTB45Q96K62 511 aaPredicted RBP13□□□□□ -0.33
SNF8-215ENST00000515572 ACAP3Q96P50 834 aa13□□□□□ -0.33
SNF8-215ENST00000515572 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
SNF8-215ENST00000515572 AAASQ9NRG9 546 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms