RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 PRSS55Q6UWB4 352 aaPredicted RBP11.76□□□□□ -0.53
CLDND1-227ENST00000513452 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 GJA10Q969M2 543 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 NELL2Q99435 816 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 TEKT3Q9BXF9 490 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 GPR62Q9BZJ7 368 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 MINDY3Q9H8M7 445 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 FNIP2Q9P278 1114 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 FBXW11Q9UKB1 542 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 CEP295Q9C0D2 2601 aa11.76□□□□□ -0.53
CLDND1-227ENST00000513452 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 SLC27A2O14975 620 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 GDF9O60383 454 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 ABCB7O75027 752 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 LRP3O75074 770 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 MAFO75444 373 aaPredicted RBP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 STBD1O95210 358 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 C8AP07357 584 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 RETP07949 1114 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 HNRNPA1P09651 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 HOXA11P31270 313 aaPredicted RBP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 CIITAP33076 1130 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 PPM1LQ5SGD2 360 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 PLA2G4FQ68DD2 849 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 ZNF852Q6ZMS4 543 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 MIER3Q7Z3K6 550 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 SMG8Q8ND04 991 aaKnown RBP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 ING5Q8WYH8 240 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 RABGGTAQ92696 567 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 SLC5A5Q92911 643 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 ZFP42Q96MM3 310 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 MBOAT7Q96N66 472 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 RIT2Q99578 217 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 COLEC11Q9BWP8 271 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 APOL6Q9BWW8 343 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 EIF2AQ9BY44 585 aaKnown RBP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 HEBP1Q9NRV9 189 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 SEMA4GQ9NTN9 838 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 NDRG2Q9UN36 371 aaKnown RBP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 MRPS17Q9Y2R5 130 aaKnown RBP11.75□□□□□ -0.53
CLDND1-227ENST00000513452 HES2Q9Y543 173 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 IPPQ9Y573 584 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
CLDND1-227ENST00000513452 ESYT2A0FGR8 921 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 ZBTB43O43298 467 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 XYLBO75191 536 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 SRGAP2CP0DJJ0 459 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 TDGF1P13385 188 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 PMLP29590 882 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 NRLP54845 237 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 ADCY1Q08828 1119 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 FZD5Q13467 585 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 PFKFB3Q16875 520 aaPredicted RBP11.74□□□□□ -0.53
CLDND1-227ENST00000513452 RTP2Q5QGT7 225 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 GPR65Q8IYL9 337 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 CELF5Q8N6W0 485 aaKnown RBP11.74□□□□□ -0.53
CLDND1-227ENST00000513452 ZMYND12Q9H0C1 365 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
CLDND1-227ENST00000513452 HCFC1R1Q9NWW0 138 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 MIOSQ9NXC5 875 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 ADAM28Q9UKQ2 775 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
CLDND1-227ENST00000513452 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
CLDND1-227ENST00000513452 ERLIN2O94905 339 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 CDC27P30260 824 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 SIM2Q14190 667 aaPredicted RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 PPP2R5DQ14738 602 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 CSRP2Q16527 193 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 PABPC1LQ4VXU2 614 aaKnown RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 IL31Q6EBC2 164 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 ANO5Q75V66 913 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 SRGAP1Q7Z6B7 1085 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 RDM1Q8NG50 284 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 SLC7A14Q8TBB6 771 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 DDX1Q92499 740 aaKnown RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 DOCK6Q96HP0 2047 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 CHRDQ9H2X0 955 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 BMP2KQ9NSY1 1161 aaPredicted RBP11.73□□□□□ -0.53
CLDND1-227ENST00000513452 CACNG4Q9UBN1 327 aa11.73□□□□□ -0.53
CLDND1-227ENST00000513452 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLDND1-227ENST00000513452 SHISA7A6NL88 538 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 TADA2AO75478 443 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 PSMD10O75832 226 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 HOXA9P31269 272 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 NPEPPSP55786 919 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 SHC2P98077 582 aa11.72□□□□□ -0.53
CLDND1-227ENST00000513452 LAMTOR4Q0VGL1 99 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms