RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SLCO1A2P46721 670 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 CSE1LP55060 971 aaKnown RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 RAB15P59190 212 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 ZBTB17Q13105 803 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 E2F2Q14209 437 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 ZNF658Q5TYW1 1059 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 VASH1Q7L8A9 365 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 SFR1Q86XK3 245 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 EPS8L3Q8TE67 593 aaKnown RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 ANKRD36BP1Q96IX9 119 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 COX4I2Q96KJ9 171 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 SPATA17Q96L03 361 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 TRIM47Q96LD4 638 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 CADM1Q9BY67 442 aaKnown RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 AMACRQ9UHK6 382 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 UTP11Q9Y3A2 253 aaKnown RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 PXDNQ92626 1479 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 DIP2AQ14689 1571 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 PNPLA7Q6ZV29 1317 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 USP6P35125 1406 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 TTLL13PA6NNM8 815 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 CES2O00748 559 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 MAPK13O15264 365 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 DKC1O60832 514 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 DCTN3O75935 186 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 NLRP6P59044 892 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 CDC16Q13042 620 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 PTGDRQ13258 359 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 SLC29A2Q14542 456 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 ARHGEF6Q15052 776 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 CNGA3Q16281 694 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 MYLK3Q32MK0 819 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 HSP90AA5PQ58FG0 334 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 FIGNQ5HY92 759 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 LMBRD2Q68DH5 695 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 ANKRD40Q6AI12 368 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 SIX5Q8N196 739 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 DDHD1Q8NEL9 900 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 PPP1R14CQ8TAE6 165 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 USP6NLQ92738 828 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 TANGO6Q9C0B7 1094 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 RBM38Q9H0Z9 239 aaKnown RBP7.8□□□□□ -1.16
CPNE4-208ENST00000511604 EBF3Q9H4W6 596 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 EMILIN3Q9NT22 766 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 ANGPTL2Q9UKU9 493 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 MTUS1Q9ULD2 1270 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 COQ6Q9Y2Z9 468 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 PCDHB2Q9Y5E7 798 aa7.8□□□□□ -1.16
CPNE4-208ENST00000511604 A0A087WZG4 1122 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 KCNK3O14649 394 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 NDC80O14777 642 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TEX28O15482 410 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 CYTH3O43739 400 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 MTRF1O75570 445 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TRMUO75648 421 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 RPL5P46777 297 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 EIF2B2P49770 351 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 BCAP31P51572 246 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TUBA1BP68363 451 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 AUHQ13825 339 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ANKDD1AQ495B1 522 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 PPP2R2DQ66LE6 453 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TTI2Q6NXR4 508 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 BTNL9Q6UXG8 535 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TUBA1AQ71U36 451 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ANO5Q75V66 913 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 RRAGAQ7L523 313 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TRIM51Q9BSJ1 452 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TMEM109Q9BVC6 243 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 NLRC4Q9NPP4 1024 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 BABAM1Q9NWV8 329 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 STXBP5LQ9Y2K9 1186 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ATP6V0A2Q9Y487 856 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ROBO2Q9HCK4 1378 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TRIM75PA6NK02 468 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 CCDC188H7C350 402 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 APOEP02649 317 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 LDHCP07864 332 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 FCER1AP12319 257 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 SLC5A2P31639 672 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 PHBP35232 272 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 TUBA4AP68366 448 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 MED21Q13503 144 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 HNRNPDQ14103 355 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 NR1D2Q14995 579 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ASTE1Q2TB18 679 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 PARP10Q53GL7 1025 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 SPDYAQ5MJ70 313 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 VSTM1Q6UX27 236 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 NEK10Q6ZWH5 1172 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 CATIPQ7Z7H3 387 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ESX1Q8N693 406 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ANKRD42Q8N9B4 389 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ACTRT1Q8TDG2 376 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 ESR2Q92731 530 aa7.79□□□□□ -1.16
CPNE4-208ENST00000511604 CNOT6LQ96LI5 555 aaKnown RBP7.79□□□□□ -1.16
CPNE4-208ENST00000511604 PITPNM3Q9BZ71 974 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms