RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 NRP1O14786 923 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 KIF3BO15066 747 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 PRC1O43663 620 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 B4GALT3O60512 393 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 CTNND1O60716 968 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 JUNP05412 331 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 MYBP10242 640 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 GYPEP15421 78 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 ADCY7P51828 1080 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 WNT3AP56704 352 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 MGAT2Q10469 447 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 SEPT2Q15019 361 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 PGS1Q32NB8 556 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 PPP4R4Q6NUP7 873 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLC4A10Q6U841 1118 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 RSPH3Q86UC2 560 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 FBXO18Q8NFZ0 1043 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLC35G2Q8TBE7 412 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 FEZF2Q8TBJ5 459 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 CCHCR1Q8TD31 782 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 HPS3Q969F9 1004 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 RAB24Q969Q5 203 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 MVB12AQ96EY5 273 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 SENP6Q9GZR1 1112 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 MANSC1Q9H8J5 431 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 GEMIN8Q9NWZ8 242 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLC4A7Q9Y6M7 1214 aa4.39□□□□□ -1.71
TRAPPC11-207ENST00000511409 A0A1W2PRX2 142 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 ERC2O15083 957 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 ADCY6O43306 1168 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLC26A4O43511 780 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 CDC14BO60729 498 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 ITGA10O75578 1167 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 EDNRBP24530 442 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 CNR2P34972 360 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 PTPN7P35236 360 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 CASRP41180 1078 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 FXR1P51114 621 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 NPEPPSP55786 919 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 PPP2CBP62714 309 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 PPP2CAP67775 309 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 HGFACQ04756 655 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 NFYCQ13952 458 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 MST1LQ2TV78 715 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 GAGE13Q4V321 117 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 Q6ZVL8 140 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 CCAR1Q8IX12 1150 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 DRC7Q8IY82 874 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 CMTM4Q8IZR5 234 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 SHCBP1Q8NEM2 672 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 OR7D4Q8NG98 312 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 MDM1Q8TC05 714 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 STON2Q8WXE9 905 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 ARL8AQ96BM9 186 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 LMF1Q96S06 567 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 CDC5LQ99459 802 aaKnown RBP4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 DPYSL5Q9BPU6 564 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 SLC12A5Q9H2X9 1139 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 BCO1Q9HAY6 547 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 LANCL2Q9NS86 450 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 TDP1Q9NUW8 608 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 GPRC5DQ9NZD1 345 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 GABBR1Q9UBS5 961 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 ZNF536O15090 1300 aa4.38□□□□□ -1.71
TRAPPC11-207ENST00000511409 MTSS1O43312 755 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 CNOT4O95628 575 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 GASTP01350 101 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 FTLP02792 175 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 ADRB1P08588 477 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 CR2P20023 1033 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 CRHR1P34998 444 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 WASP42768 502 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 RIN1Q13671 783 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 SURF1Q15526 300 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 ATAT1Q5SQI0 421 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 ERICH6BQ5W0A0 696 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 PDZD4Q76G19 769 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 TTC7BQ86TV6 843 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 GIMAP8Q8ND71 665 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 REPS2Q8NFH8 660 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 DIS3LQ8TF46 1054 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 RABGGTAQ92696 567 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 C1GALT1C1Q96EU7 318 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 NEIL1Q96FI4 390 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 TMX3Q96JJ7 454 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 CLPTM1LQ96KA5 538 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 TAAR9Q96RI9 348 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 GPHA2Q96T91 129 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 ACO2Q99798 780 aaKnown RBP4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 PDCD2LQ9BRP1 358 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 IL23AQ9NPF7 189 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 KMT5AQ9NQR1 393 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 PRDM11Q9NQV5 511 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 TMEM140Q9NV12 185 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 OBP2AQ9NY56 170 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 TRPS1Q9UHF7 1281 aa4.37□□□□□ -1.71
TRAPPC11-207ENST00000511409 OAZ3Q9UMX2 235 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms