RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 MCF2P10911 925 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 PROZP22891 400 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 CASP1P29466 404 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 MATR3P43243 847 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL6A6-203ENST00000511332 EHHADHQ08426 723 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 PAN2Q504Q3 1202 aaKnown RBP14.09□□□□□ -0.15
COL6A6-203ENST00000511332 ZC2HC1CQ53FD0 456 aaPredicted RBP14.09□□□□□ -0.15
COL6A6-203ENST00000511332 CLLU1OSQ5K130 101 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 EEF1DP3Q658K8 133 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 URGCPQ8TCY9 931 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 HELQQ8TDG4 1101 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 SAMD11Q96NU1 681 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 ACCSQ96QU6 501 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 TCHPQ9BT92 498 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 CDT1Q9H211 546 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 USP20Q9Y2K6 914 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 PLXNA4Q9HCM2 1894 aa14.09□□□□□ -0.15
COL6A6-203ENST00000511332 ATG2AQ2TAZ0 1938 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 LINC01553A4QN01 128 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 CLDN3O15551 220 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
COL6A6-203ENST00000511332 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 MYBP10242 640 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 GATMP50440 423 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 CASP5P51878 434 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 TAP1Q03518 808 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 DPYDQ12882 1025 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 PSMD2Q13200 908 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 AGMOQ6ZNB7 445 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 SYCP3Q8IZU3 236 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 LPPQ93052 612 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 TGS1Q96RS0 853 aaKnown RBP14.08□□□□□ -0.16
COL6A6-203ENST00000511332 CCDC94Q9BW85 323 aaPredicted RBP14.08□□□□□ -0.16
COL6A6-203ENST00000511332 APOL6Q9BWW8 343 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 ZNF576Q9H609 170 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 TMEM206Q9H813 350 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 PTPRHQ9HD43 1115 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 RNF19AQ9NV58 838 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 GIT1Q9Y2X7 761 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 HES2Q9Y543 173 aa14.08□□□□□ -0.16
COL6A6-203ENST00000511332 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 ABLIM1O14639 778 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 KLRC4O43908 158 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 SMC2O95347 1197 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 GRM5P41594 1212 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 MCL1Q07820 350 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 KYAT1Q16773 422 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 KMT5BQ4FZB7 885 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 NOMO2Q5JPE7 1267 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 SLFN12LQ6IEE8 588 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
COL6A6-203ENST00000511332 CLP1Q92989 425 aaKnown RBP14.07□□□□□ -0.16
COL6A6-203ENST00000511332 CASD1Q96PB1 797 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 TOPORSQ9NS56 1045 aaPredicted RBP14.07□□□□□ -0.16
COL6A6-203ENST00000511332 RMND1Q9NWS8 449 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 KANSL3Q9P2N6 904 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 INPP5FQ9Y2H2 1132 aa14.07□□□□□ -0.16
COL6A6-203ENST00000511332 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
COL6A6-203ENST00000511332 MEIS3P2A8K0S8 358 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 INPPL1O15357 1258 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 OFD1O75665 1012 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 RECQL4O94761 1208 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 RHOBTB3O94955 611 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 KIF20AO95235 890 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 HARSP12081 509 aaKnown RBP14.06□□□□□ -0.16
COL6A6-203ENST00000511332 LAG3P18627 525 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 CTNNB1P35222 781 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 MLH1P40692 756 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 YARSP54577 528 aaKnown RBP14.06□□□□□ -0.16
COL6A6-203ENST00000511332 ERVK-21P61565 698 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 RNASELQ05823 741 aaKnown RBP14.06□□□□□ -0.16
COL6A6-203ENST00000511332 PNOCQ13519 176 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 KCNB1Q14721 858 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 SPOUT1Q5T280 376 aaKnown RBP14.06□□□□□ -0.16
COL6A6-203ENST00000511332 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
COL6A6-203ENST00000511332 ZBTB33Q86T24 672 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 HPS3Q969F9 1004 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 AAASQ9NRG9 546 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 PARP2Q9UGN5 583 aa14.06□□□□□ -0.16
COL6A6-203ENST00000511332 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 OGTO15294 1046 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
COL6A6-203ENST00000511332 ARHGEF15O94989 841 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 AKAP5P24588 427 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 BMT2Q1RMZ1 405 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 SLC39A4Q6P5W5 647 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 FBXO22Q8NEZ5 403 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 SMARCE1Q969G3 411 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 ZBTB45Q96K62 511 aaPredicted RBP14.05□□□□□ -0.16
COL6A6-203ENST00000511332 GSDMAQ96QA5 445 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 MSTO1Q9BUK6 570 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 PLVAPQ9BX97 442 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
COL6A6-203ENST00000511332 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 TTYH1Q9H313 450 aaPredicted RBP14.05□□□□□ -0.16
COL6A6-203ENST00000511332 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 TBC1D13Q9NVG8 400 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms