RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NSFL1CQ9UNZ2 370 aaKnown RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 CDYLQ9Y232 598 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 ATP1A3P13637 1013 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 KIAA1755Q5JYT7 1200 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 HP1BP3Q5SSJ5 553 aaPredicted RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 E4F1Q66K89 784 aaPredicted RBP8.84□□□□□ -0.99
HTT-208ENST00000510626 MAGEB18Q96M61 343 aa8.84□□□□□ -0.99
HTT-208ENST00000510626 IGF2BP3O00425 579 aaKnown RBP eCLIP8.84□□□□□ -1
HTT-208ENST00000510626 NPR1P16066 1061 aa8.84□□□□□ -1
HTT-208ENST00000510626 ROR1Q01973 937 aa8.84□□□□□ -1
HTT-208ENST00000510626 CCDC144BQ3MJ40 725 aa8.84□□□□□ -1
HTT-208ENST00000510626 KLHL12Q53G59 568 aa8.84□□□□□ -1
HTT-208ENST00000510626 RASSF5Q8WWW0 418 aa8.84□□□□□ -1
HTT-208ENST00000510626 TADA1Q96BN2 335 aa8.84□□□□□ -1
HTT-208ENST00000510626 KMT5AQ9NQR1 393 aa8.84□□□□□ -1
HTT-208ENST00000510626 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.84□□□□□ -1
HTT-208ENST00000510626 KPNA4O00629 521 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 GPS1Q13098 491 aa8.83□□□□□ -1
HTT-208ENST00000510626 PABPC4Q13310 644 aaKnown RBP eCLIP8.83□□□□□ -1
HTT-208ENST00000510626 RXFP1Q9HBX9 757 aa8.83□□□□□ -1
HTT-208ENST00000510626 CFBP00751 764 aa8.83□□□□□ -1
HTT-208ENST00000510626 MECOMQ03112 1051 aa8.83□□□□□ -1
HTT-208ENST00000510626 PARVAQ9NVD7 372 aa8.83□□□□□ -1
HTT-208ENST00000510626 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
HTT-208ENST00000510626 RABGEF1Q9UJ41 708 aa8.83□□□□□ -1
HTT-208ENST00000510626 ADSLP30566 484 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 TBX22Q9Y458 520 aa8.83□□□□□ -1
HTT-208ENST00000510626 PXDNLA1KZ92 1463 aa8.83□□□□□ -1
HTT-208ENST00000510626 NQO1P15559 274 aaKnown RBP8.83□□□□□ -1
HTT-208ENST00000510626 CCND2P30279 289 aa8.83□□□□□ -1
HTT-208ENST00000510626 ZCWPW2Q504Y3 356 aa8.83□□□□□ -1
HTT-208ENST00000510626 EPAS1Q99814 870 aa8.83□□□□□ -1
HTT-208ENST00000510626 FANCEQ9HB96 536 aa8.83□□□□□ -1
HTT-208ENST00000510626 ANAPC7Q9UJX3 599 aa8.83□□□□□ -1
HTT-208ENST00000510626 FKBP6O75344 327 aa8.83□□□□□ -1
HTT-208ENST00000510626 CYP27A1Q02318 531 aa8.83□□□□□ -1
HTT-208ENST00000510626 ITKQ08881 620 aa8.83□□□□□ -1
HTT-208ENST00000510626 NR1I3Q14994 352 aa8.83□□□□□ -1
HTT-208ENST00000510626 XXYLT1Q8NBI6 393 aa8.83□□□□□ -1
HTT-208ENST00000510626 MCPH1Q8NEM0 835 aa8.83□□□□□ -1
HTT-208ENST00000510626 ZNF577Q9BSK1 485 aa8.83□□□□□ -1
HTT-208ENST00000510626 POTEMA6NI47 508 aa8.83□□□□□ -1
HTT-208ENST00000510626 SNX2O60749 519 aa8.83□□□□□ -1
HTT-208ENST00000510626 POTEHQ6S545 545 aa8.83□□□□□ -1
HTT-208ENST00000510626 POTEGQ6S5H5 508 aa8.83□□□□□ -1
HTT-208ENST00000510626 CAPN12Q6ZSI9 719 aa8.83□□□□□ -1
HTT-208ENST00000510626 SKA2Q8WVK7 121 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 STK33Q9BYT3 514 aa8.83□□□□□ -1
HTT-208ENST00000510626 FTOQ9C0B1 505 aaKnown RBP eCLIP8.83□□□□□ -1
HTT-208ENST00000510626 DLGAP2Q9P1A6 1054 aa8.83□□□□□ -1
HTT-208ENST00000510626 FAM32AQ9Y421 112 aaKnown RBP8.83□□□□□ -1
HTT-208ENST00000510626 SMIM31A0A1B0GVY4 71 aa8.83□□□□□ -1
HTT-208ENST00000510626 VWA5AO00534 786 aa8.83□□□□□ -1
HTT-208ENST00000510626 TKTP29401 623 aaKnown RBP8.83□□□□□ -1
HTT-208ENST00000510626 CCDC126Q96EE4 140 aa8.83□□□□□ -1
HTT-208ENST00000510626 ATP10AO60312 1499 aa8.83□□□□□ -1
HTT-208ENST00000510626 PRR23D1E9PI22 279 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 PRR23D2P0DMB1 279 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 IL1RL1Q01638 556 aa8.83□□□□□ -1
HTT-208ENST00000510626 PIGHQ14442 188 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 ERICH1Q86X53 443 aa8.83□□□□□ -1
HTT-208ENST00000510626 METTL23Q86XA0 190 aa8.83□□□□□ -1
HTT-208ENST00000510626 PALB2Q86YC2 1186 aa8.83□□□□□ -1
HTT-208ENST00000510626 KLHL23Q8NBE8 558 aa8.83□□□□□ -1
HTT-208ENST00000510626 DLG3Q92796 817 aa8.83□□□□□ -1
HTT-208ENST00000510626 JARID2Q92833 1246 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 PGBD1Q96JS3 809 aa8.83□□□□□ -1
HTT-208ENST00000510626 SUPT3HO75486 399 aa8.83□□□□□ -1
HTT-208ENST00000510626 MYCLP12524 364 aaPredicted RBP8.83□□□□□ -1
HTT-208ENST00000510626 CALN1Q9BXU9 219 aa8.83□□□□□ -1
HTT-208ENST00000510626 KIAA0825Q8IV33 1275 aa8.83□□□□□ -1
HTT-208ENST00000510626 ANKRD13CQ8N6S4 541 aa8.83□□□□□ -1
HTT-208ENST00000510626 CARD9Q9H257 536 aa8.83□□□□□ -1
HTT-208ENST00000510626 SAR1AQ9NR31 198 aa8.83□□□□□ -1
HTT-208ENST00000510626 RP1L1Q8IWN7 2480 aaPredicted RBP8.82□□□□□ -1
HTT-208ENST00000510626 SAGE2PA6NJ88 616 aa8.82□□□□□ -1
HTT-208ENST00000510626 SRGNP10124 158 aa8.82□□□□□ -1
HTT-208ENST00000510626 KLHL4Q9C0H6 718 aa8.82□□□□□ -1
HTT-208ENST00000510626 SLCO1B7G3V0H7 640 aa8.82□□□□□ -1
HTT-208ENST00000510626 MTSS1O43312 755 aa8.82□□□□□ -1
HTT-208ENST00000510626 TNFAIP8O95379 198 aa8.82□□□□□ -1
HTT-208ENST00000510626 RAD54LQ92698 747 aa8.82□□□□□ -1
HTT-208ENST00000510626 CENPTQ96BT3 561 aa8.82□□□□□ -1
HTT-208ENST00000510626 NR1H4Q96RI1 486 aaPredicted RBP8.82□□□□□ -1
HTT-208ENST00000510626 PRMT1Q99873 361 aaKnown RBP8.82□□□□□ -1
HTT-208ENST00000510626 DCTN4Q9UJW0 460 aa8.82□□□□□ -1
HTT-208ENST00000510626 RPS8P62241 208 aaKnown RBP8.82□□□□□ -1
HTT-208ENST00000510626 GJC2Q5T442 439 aaPredicted RBP8.82□□□□□ -1
HTT-208ENST00000510626 CALML6Q8TD86 181 aa8.82□□□□□ -1
HTT-208ENST00000510626 MRPL48Q96GC5 212 aaKnown RBP8.82□□□□□ -1
HTT-208ENST00000510626 CHMP2BQ9UQN3 213 aa8.82□□□□□ -1
HTT-208ENST00000510626 SNX24Q9Y343 169 aa8.82□□□□□ -1
HTT-208ENST00000510626 P4HA2O15460 535 aa8.82□□□□□ -1
HTT-208ENST00000510626 SF3A3Q12874 501 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■■□ 21.5
HTT-208ENST00000510626 CLPTM1O96005 669 aa8.82□□□□□ -1
HTT-208ENST00000510626 GCP02774 474 aa8.82□□□□□ -1
HTT-208ENST00000510626 SAT1P21673 171 aa8.82□□□□□ -1
HTT-208ENST00000510626 NR5A1Q13285 461 aa8.82□□□□□ -1
HTT-208ENST00000510626 MFSD14BQ5SR56 506 aa8.82□□□□□ -1
HTT-208ENST00000510626 CENPPQ6IPU0 288 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms