RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 BFSP2Q13515 415 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SNW1Q13573 536 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SART3Q15020 963 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PPP2R5BQ15173 497 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 FSCN1Q16658 493 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 IMMTQ16891 758 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 CLEC16AQ2KHT3 1053 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF792Q3KQV3 632 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCDC144BQ3MJ40 725 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 GNPTABQ3T906 1256 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 IQSEC1Q6DN90 963 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 RCSD1Q6JBY9 416 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 MFSD5Q6N075 450 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF574Q6ZN55 896 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 RNF207Q6ZRF8 634 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 ANKS3Q6ZW76 656 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 KCTD1Q719H9 257 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 EEPD1Q7L9B9 569 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 TLK2Q86UE8 772 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 VSIG10LQ86VR7 867 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 FLCNQ8NFG4 579 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PIWIL2Q8TC59 973 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 BCL7CQ8WUZ0 217 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SREK1Q8WXA9 508 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 DHX38Q92620 1227 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 UBE2FQ969M7 185 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 MISP3Q96FF7 219 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 YTHDC1Q96MU7 727 aaKnown RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 CDX2Q99626 313 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 HIPK3Q9H422 1215 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 DCTPP1Q9H773 170 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC38A10Q9HBR0 1119 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 VTA1Q9NP79 307 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PDLIM7Q9NR12 457 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 HELLSQ9NRZ9 838 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 MTMR4Q9NYA4 1195 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCDC39Q9UFE4 941 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 CTNNA3Q9UI47 895 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF214Q9UL59 606 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC5A6Q9Y289 635 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC4A7Q9Y6M7 1214 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 SYNRGQ9UMZ2 1314 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 PHIPQ8WWQ0 1821 aa4.37□□□□□ -1.71
HMGN1P11-201ENST00000508668 MYH8P13535 1937 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 SHISA3A0PJX4 238 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 GSG1L2A8MUP6 293 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 WASH4PA8MWX3 477 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ARVCFO00192 962 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 MEIS1O00470 390 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ATP2A1O14983 1001 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 KIAA0355O15063 1070 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 NKRFO15226 690 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ICAM1P05362 532 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 PFKMP08237 780 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC7A5Q01650 507 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 NMIQ13287 307 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 IKZF1Q13422 519 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ITGA7Q13683 1181 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 BBS9Q3SYG4 887 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 MCMDC2Q4G0Z9 681 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 AXDND1Q5T1B0 1012 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 GPATCH4Q5T3I0 446 aaKnown RBP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ARTNQ5T4W7 220 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 SYDE2Q5VT97 1194 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ARHGEF16Q5VV41 709 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 CXCL17Q6UXB2 119 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 MAMDC4Q6UXC1 1216 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ANKRD33Q7Z3H0 272 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 TMC3Q7Z5M5 1100 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 RALYLQ86SE5 291 aaKnown RBP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 DHX37Q8IY37 1157 aaKnown RBP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 C7orf31Q8N865 590 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRPV1Q8NER1 839 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 OR6J1Q8NGC5 347 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 SCFD2Q8WU76 684 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 RUFY2Q8WXA3 655 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ASB11Q8WXH4 323 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 MYLIPQ8WY64 445 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 MKL1Q969V6 931 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 TTC14Q96N46 770 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 WDR11Q9BZH6 1224 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 GPR62Q9BZJ7 368 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 KRT23Q9C075 422 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRDM14Q9GZV8 571 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRO3102Q9H379 93 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRIT1Q9H3H1 467 aaKnown RBP4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 ATP13A1Q9HD20 1204 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 SEMA3GQ9NS98 782 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 VAV3Q9UKW4 847 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 PCDHB12Q9Y5F1 795 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 SNX11Q9Y5W9 270 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 FOCADQ5VW36 1801 aa4.36□□□□□ -1.71
HMGN1P11-201ENST00000508668 PLXNB2O15031 1838 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 LOC102724159A0A0B4J2E5 919 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRIM43BA6NCK2 446 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 B2RBV5 119 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 M0R2C6 588 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 NOP56O00567 594 aaKnown RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 ADAMTS4O75173 837 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms