RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ZCCHC17Q9NP64 241 aaKnown RBP5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 C1orf112Q9NSG2 853 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 ANKEF1Q9NU02 776 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 PDP2Q9P2J9 529 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 GJD2Q9UKL4 321 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 TMCC3Q9ULS5 477 aa5.02□□□□□ -1.61
SMARCA5-202ENST00000508573 A0A1W2PQU0 124 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 FAM170AA1A519 330 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 GTPBP10A4D1E9 387 aaKnown RBP5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 C19orf81C9J6K1 198 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 NPIPB8E9PQR5 432 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 KRIT1O00522 736 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 NCAM2O15394 837 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 PLOD3O60568 738 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 HMMRO75330 724 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 HNRNPCP07910 306 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 PSMA3P25788 255 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 KIF22Q14807 665 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 PDCD2Q16342 344 aaPredicted RBP5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 GJC2Q5T442 439 aaPredicted RBP5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 VASNQ6EMK4 673 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 SWSAP1Q6NVH7 229 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 Q6ZUG5 572 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 FGD2Q7Z6J4 655 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 TRIM48Q8IWZ4 208 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 APPL2Q8NEU8 664 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC35G2Q8TBE7 412 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 PHOSPHO1Q8TCT1 267 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 NUP133Q8WUM0 1156 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 ZBTB10Q96DT7 871 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 CCDC138Q96M89 665 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 LRRC37BQ96QE4 947 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 LMF1Q96S06 567 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 MEGF9Q9H1U4 602 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 EPN3Q9H201 632 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 MRGBPQ9NV56 204 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 ASH2LQ9UBL3 628 aa5.01□□□□□ -1.61
SMARCA5-202ENST00000508573 TPP1O14773 563 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 AREL1O15033 823 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 FOXS1O43638 330 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 CTNND1O60716 968 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 KLHL18O94889 574 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 ARIH2O95376 493 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 MYBP10242 640 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 GALNSP34059 522 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 HOXD12P35452 270 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 DEKP35659 375 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 IL6STP40189 918 aaPredicted RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 MMP14P50281 582 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 GFRA1P56159 465 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 TGFB2P61812 414 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 FOXE3Q13461 319 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 FHL2Q14192 279 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 PRKD1Q15139 912 aaPredicted RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 TERF2Q15554 542 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 TESK1Q15569 626 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 SMAD2Q15796 467 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 NRN1LQ496H8 165 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 TRIM61Q5EBN2 209 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 SPATA1Q5VX52 437 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 FAAH2Q6GMR7 532 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 TCTN3Q6NUS6 607 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 TLDC1Q6P9B6 456 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 CYP26C1Q6V0L0 522 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 CCDC129Q6ZRS4 1044 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 BRAPQ7Z569 592 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 RALYLQ86SE5 291 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 PROSER1Q86XN7 944 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 SCUBE1Q8IWY4 988 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 MYCT1Q8N699 235 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 HSPBAP1Q96EW2 488 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 FAXDC2Q96IV6 333 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 ZMAT2Q96NC0 199 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 TAAR9Q96RI9 348 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 BARD1Q99728 777 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 SEC61A2Q9H9S3 476 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC6A20Q9NP91 592 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 DLL4Q9NR61 685 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 HSPBP1Q9NZL4 362 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 ARHGAP28Q9P2N2 729 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 APOBEC2Q9Y235 224 aaKnown RBP5□□□□□ -1.61
SMARCA5-202ENST00000508573 CRYL1Q9Y2S2 319 aa5□□□□□ -1.61
SMARCA5-202ENST00000508573 TRAV20A0A0B4J274 112 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 SYNDIG1LA6NDD5 238 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 SMTNL1A8MU46 457 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 AP1G1O43747 822 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 OPA1O60313 960 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PCDHGA12O60330 932 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 TIPRLO75663 272 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 ASLP04424 464 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 JMJD7P0C870 316 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 COL6A2P12110 1019 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 KRT20P35900 424 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 PPFIA1Q13136 1202 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 SLC45A4Q5BKX6 768 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 IQSEC1Q6DN90 963 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 GPR155Q7Z3F1 870 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 CATIPQ7Z7H3 387 aa4.99□□□□□ -1.61
SMARCA5-202ENST00000508573 TAX1BP1Q86VP1 789 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms