RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.51□□□□□ -0.73
NEDD9-211ENST00000508546 KANSL1LA0AUZ9 987 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 C1QTNF9BB2RNN3 333 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
NEDD9-211ENST00000508546 C1QTNF9P0C862 333 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 MAGEA9P43362 315 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 OR1G1P47890 313 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 Q4G0T1 1027 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 ANO5Q75V66 913 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 GET4Q7L5D6 327 aaPredicted RBP10.51□□□□□ -0.73
NEDD9-211ENST00000508546 EXOC8Q8IYI6 725 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 PHKBQ93100 1093 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 SH2D3AQ9BRG2 576 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 OSBPL6Q9BZF3 934 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 MINDY3Q9H8M7 445 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 PPME1Q9Y570 386 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 LOC400499M0QZD8 3231 aa10.51□□□□□ -0.73
NEDD9-211ENST00000508546 VWA8A3KMH1 1905 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 WDFY3Q8IZQ1 3526 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 CYP3A7-CYP3A51PA0A087WV96 503 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 LAMTOR5O43504 91 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 TGM5O43548 720 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 LILRB5O75023 590 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 ZMYND10O75800 440 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 HMGB1P09429 215 aaKnown RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 SPATA31D3P0C874 917 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 ITGA4P13612 1032 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 CYP3A7P24462 503 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 PSMC5P62195 406 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 GPC5P78333 572 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 PRKCQQ04759 706 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 SPEM2Q0P670 501 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 KRT32Q14532 448 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 PCBP1Q15365 356 aaKnown RBP eCLIP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 ADCK5Q3MIX3 580 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 N4BP2L1Q5TBK1 243 aaPredicted RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 RSPO2Q6UXX9 243 aaPredicted RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 SPATA31D4Q6ZUB0 917 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 PALB2Q86YC2 1186 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 ZBTB44Q8NCP5 570 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 SMG8Q8ND04 991 aaKnown RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 PSPC1Q8WXF1 523 aaKnown RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 SLC7A3Q8WY07 619 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 FGF14Q92915 247 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 GJA10Q969M2 543 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 MBOAT7Q96N66 472 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 COLEC11Q9BWP8 271 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 BCO2Q9BYV7 579 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 C22orf23Q9BZE7 217 aa10.5□□□□□ -0.73
NEDD9-211ENST00000508546 DHX33Q9H6R0 707 aaKnown RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 SMG1Q96Q15 3661 aaKnown RBP10.5□□□□□ -0.73
NEDD9-211ENST00000508546 TRIP11Q15643 1979 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 ARL5CA6NH57 179 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 ASAP2O43150 1006 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 DKC1O60832 514 aaKnown RBP eCLIP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 NR1I2O75469 434 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 MYBP10242 640 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 FSHRP23945 695 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 AXLP30530 894 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 AKAP17AQ02040 695 aaKnown RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 CREMQ03060 361 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 MLF2Q15773 248 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 NTRK3Q16288 839 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 USP41Q3LFD5 358 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 PLA2G4FQ68DD2 849 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 FUT10Q6P4F1 479 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 MOXD1Q6UVY6 613 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 PARM1Q6UWI2 310 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 UNQ6494/PRO21346Q6UXR6 183 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 MTSS1LQ765P7 747 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 RASEFQ8IZ41 740 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 ETNPPLQ8TBG4 499 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 TBCKQ8TEA7 893 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 PRPF31Q8WWY3 499 aaKnown RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 ATRIPQ8WXE1 791 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 NELL1Q92832 810 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 CCDC51Q96ER9 411 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 GAD1Q99259 594 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 RPP25Q9BUL9 199 aaKnown RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 GPR62Q9BZJ7 368 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 SH3GLB2Q9NR46 395 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 SPATA6Q9NWH7 488 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 MIOSQ9NXC5 875 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 GMEB2Q9UKD1 530 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 CDH7Q9ULB5 785 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 NAP1L2Q9ULW6 460 aaPredicted RBP10.49□□□□□ -0.73
NEDD9-211ENST00000508546 IPPQ9Y573 584 aa10.49□□□□□ -0.73
NEDD9-211ENST00000508546 NAV2Q8IVL1 2488 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 HELZ2Q9BYK8 2649 aaKnown RBP10.48□□□□□ -0.73
NEDD9-211ENST00000508546 F8W810 466 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 ERLIN2O94905 339 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 NEFLP07196 543 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 HNRNPA1P09651 372 aaKnown RBP eCLIP10.48□□□□□ -0.73
NEDD9-211ENST00000508546 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 HOXA9P31269 272 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 MLH1P40692 756 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 RFC5P40937 340 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms