RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	CSDE1	O75534	798 aa	Known RBP	10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	DARS	P14868	501 aa	Known RBP	10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	U2AF2	P26368	475 aa	Known RBP eCLIP	10.27	□□□□□ -0.77	3e-9	■■■□□ 15
UBE2D3-223	ENST00000508249	GBP2	P32456	591 aa	Predicted RBP	10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PHKA2	P46019	1235 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	LMNB2	Q03252	620 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	DRP2	Q13474	957 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CALCRL	Q16602	461 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SWSAP1	Q6NVH7	229 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	DCLRE1A	Q6PJP8	1040 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PPFIBP1	Q86W92	1011 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	ZNF280B	Q86YH2	543 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	NOSTRIN	Q8IVI9	506 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CKAP2L	Q8IYA6	745 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	EXOC8	Q8IYI6	725 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	LRRC71	Q8N4P6	559 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SNX21	Q969T3	373 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TRAIP	Q9BWF2	469 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PRMT8	Q9NR22	394 aa	Predicted RBP	10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GJB4	Q9NTQ9	266 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	MARCH5	Q9NX47	278 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PCDHGA2	Q9Y5H1	932 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	STK24	Q9Y6E0	443 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	NUMBL	Q9Y6R0	609 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	IGF2R	P11717	2491 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	DSP	P15924	2871 aa	Known RBP	10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	VWA8	A3KMH1	1905 aa		10.27	□□□□□ -0.77
UBE2D3-223	ENST00000508249	ARID2	Q68CP9	1835 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SETX	Q7Z333	2677 aa	Known RBP	10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CCDC195	A0A1B0GUA6	201 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PRR5-ARHGAP8	B1AHC4	643 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249		H3BQV1	296 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	INPPL1	O15357	1258 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SLC37A4	O43826	429 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	ZNF862	O60290	1169 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	DDHD2	O94830	711 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	OAT	P04181	439 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	LAMP2	P13473	410 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GJB2	P29033	226 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PSMC5	P62195	406 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	ARHGAP8	P85298	464 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	FZD5	Q13467	585 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	EPHA7	Q15375	998 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	XKR3	Q5GH77	459 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PPM1J	Q5JR12	505 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TAS1R1	Q7RTX1	841 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	FGF14	Q92915	247 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	NXPE3	Q969Y0	559 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	JPH2	Q9BR39	696 aa	Predicted RBP	10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	UNC45A	Q9H3U1	944 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GABBR1	Q9UBS5	961 aa		10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.26	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TICRR	Q7Z2Z1	1910 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249		F8W810	466 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249		K7ELQ4	463 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	LAD1	O00515	517 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SLC30A4	O14863	429 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TEX28	O15482	410 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CHMP2A	O43633	222 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	OFD1	O75665	1012 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CD2BP2	O95400	341 aa	Known RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SSB	P05455	408 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	P4HB	P07237	508 aa	Known RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	MYB	P10242	640 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	ZSCAN20	P17040	1043 aa	Predicted RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SDHB	P21912	280 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TMOD1	P28289	359 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	QARS	P47897	775 aa	Known RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CDC42EP1	Q00587	391 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GUCY1B3	Q02153	619 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	LONRF3	Q496Y0	759 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	RILPL1	Q5EBL4	403 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	EARS2	Q5JPH6	523 aa	Known RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TSSK4	Q6SA08	328 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	POTED	Q86YR6	584 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	HSCB	Q8IWL3	235 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	ZNF687	Q8N1G0	1237 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	METTL13	Q8N6R0	699 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GPR161	Q8N6U8	529 aa	Known RBP	10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	HAS1	Q92839	578 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	CEP89	Q96ST8	783 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	RAB34	Q9BZG1	259 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	VAV3	Q9UKW4	847 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PCDHA12	Q9UN75	941 aa		10.25	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PDCD11	Q14690	1871 aa	Known RBP	10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	KANSL1L	A0AUZ9	987 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GAS2	O43903	313 aa	Known RBP	10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	BMP15	O95972	392 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	OR52Z1	P0C646	297 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	MUT	P22033	750 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	RFX1	P22670	979 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	TARS	P26639	723 aa	Known RBP	10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	KLRC2	P26717	231 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PML	P29590	882 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	FOSB	P53539	338 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	GPC5	P78333	572 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	PRKCE	Q02156	737 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	SNW1	Q13573	536 aa	Known RBP	10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	UGCG	Q16739	394 aa		10.24	□□□□□ -0.77
UBE2D3-223	ENST00000508249	NOMO2	Q5JPE7	1267 aa		10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms