RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 CTNNB1P35222 781 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 RNASELQ05823 741 aaKnown RBP16.44■□□□□ 0.22
RNF4-210ENST00000508235 COASYQ13057 564 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 EPC2Q52LR7 807 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 UNC13DQ70J99 1090 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 CDX2Q99626 313 aaPredicted RBP16.44■□□□□ 0.22
RNF4-210ENST00000508235 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
RNF4-210ENST00000508235 APOL6Q9BWW8 343 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 PRDM12Q9H4Q4 367 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 PTPRHQ9HD43 1115 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 TYW1Q9NV66 732 aaKnown RBP16.44■□□□□ 0.22
RNF4-210ENST00000508235 PARP2Q9UGN5 583 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 INPP5FQ9Y2H2 1132 aa16.44■□□□□ 0.22
RNF4-210ENST00000508235 INPPL1O15357 1258 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
RNF4-210ENST00000508235 PROZP22891 400 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
RNF4-210ENST00000508235 KYAT1Q16773 422 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 EEF1DP3Q658K8 133 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 KRBA2Q6ZNG9 492 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 MAP4K3Q8IVH8 894 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 P2RX5Q93086 422 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 CCDC47Q96A33 483 aaKnown RBP16.43■□□□□ 0.22
RNF4-210ENST00000508235 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
RNF4-210ENST00000508235 RPS6KC1Q96S38 1066 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 CCDC94Q9BW85 323 aaPredicted RBP16.43■□□□□ 0.22
RNF4-210ENST00000508235 TOPORSQ9NS56 1045 aaPredicted RBP16.43■□□□□ 0.22
RNF4-210ENST00000508235 TBC1D7Q9P0N9 293 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 USP20Q9Y2K6 914 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 HES2Q9Y543 173 aa16.43■□□□□ 0.22
RNF4-210ENST00000508235 COL4A4P53420 1690 aaPredicted RBP16.43■□□□□ 0.22
RNF4-210ENST00000508235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
RNF4-210ENST00000508235 ARL5CA6NH57 179 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 MEIS3P2A8K0S8 358 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 H3BNC9 293 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 PPP1R37O75864 691 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 LINC00271P0C7V0 271 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 PPM1AP35813 382 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 MLH1P40692 756 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 GRM5P41594 1212 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 MATR3P43243 847 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■■■□ 21.4
RNF4-210ENST00000508235 YARSP54577 528 aaKnown RBP16.42■□□□□ 0.22
RNF4-210ENST00000508235 CUL4BQ13620 913 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 ZC2HC1CQ53FD0 456 aaPredicted RBP16.42■□□□□ 0.22
RNF4-210ENST00000508235 FAM26FQ5R3K3 315 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 L1TD1Q5T7N2 865 aaKnown RBP16.42■□□□□ 0.22
RNF4-210ENST00000508235 SLFN12LQ6IEE8 588 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 GUCD1Q96NT3 240 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 ACCSQ96QU6 501 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 GAD1Q99259 594 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 STRA6Q9BX79 667 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 CDT1Q9H211 546 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 CWH43Q9H720 699 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 TMEM206Q9H813 350 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 TBC1D13Q9NVG8 400 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 ANKFY1Q9P2R3 1169 aa16.42■□□□□ 0.22
RNF4-210ENST00000508235 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
RNF4-210ENST00000508235 MYO9BQ13459 2157 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 FOSL2P15408 326 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 AKAP5P24588 427 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
RNF4-210ENST00000508235 MCL1Q07820 350 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 GPM6BQ13491 265 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 POSTNQ15063 836 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 PTPROQ16827 1216 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 LRRC55Q6ZSA7 311 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 GRAMD1CQ8IYS0 662 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
RNF4-210ENST00000508235 COLGALT1Q8NBJ5 622 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 EXOC1Q9NV70 894 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 SNTG2Q9NY99 539 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 LMCD1Q9NZU5 365 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 CITO14578 2027 aa16.41■□□□□ 0.22
RNF4-210ENST00000508235 ABLIM1O14639 778 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 EIF3DO15371 548 aaKnown RBP eCLIP16.4■□□□□ 0.22
RNF4-210ENST00000508235 RECQL4O94761 1208 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 MYBP10242 640 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 GRIK3Q13003 919 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 PSMD2Q13200 908 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 KCNT2Q6UVM3 1135 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 CLEC17AQ6ZS10 378 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 SPRED2Q7Z698 418 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 GDPD5Q8WTR4 605 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 MYLIPQ8WY64 445 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 TIGD1Q96MW7 591 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 ACAP3Q96P50 834 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 TMEM175Q9BSA9 504 aa16.4■□□□□ 0.22
RNF4-210ENST00000508235 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms