RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 C4orf19Q8IY42 314 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 DCLK2Q8N568 766 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 NELL1Q92832 810 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 TMEM143Q96AN5 459 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 SLC26A6Q9BXS9 759 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 FBXO4Q9UKT5 387 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 GIT1Q9Y2X7 761 aa18.36■□□□□ 0.53
SNF8-205ENST00000507302 SLC37A4O43826 429 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 P4HBP07237 508 aaKnown RBP18.35■□□□□ 0.53
SNF8-205ENST00000507302 SRGAP2CP0DJJ0 459 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 PDIA3P30101 505 aaKnown RBP18.35■□□□□ 0.53
SNF8-205ENST00000507302 MLH1P40692 756 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 SCNN1GP51170 649 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 NLRP5P59047 1200 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 CREMQ03060 361 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 AMHR2Q16671 573 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 USP41Q3LFD5 358 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 SPECC1Q5M775 1068 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 FUT10Q6P4F1 479 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 PALB2Q86YC2 1186 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 RNF149Q8NC42 400 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 TCP11Q8WWU5 503 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 FGF14Q92915 247 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 SHDQ96IW2 340 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 FAM20AQ96MK3 541 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 ZFP42Q96MM3 310 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 RPP25Q9BUL9 199 aaKnown RBP18.35■□□□□ 0.53
SNF8-205ENST00000507302 COLEC11Q9BWP8 271 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 FOXQ1Q9C009 403 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 CSRNP2Q9H175 543 aa18.35■□□□□ 0.53
SNF8-205ENST00000507302 SPTLC1O15269 473 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 RFX1P22670 979 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 RPS6KB1P23443 525 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 FGD1P98174 961 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 GALNT17Q6IS24 598 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 NOTUMQ6P988 496 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 GET4Q7L5D6 327 aaPredicted RBP18.34■□□□□ 0.53
SNF8-205ENST00000507302 BLIDQ8IZY5 108 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 ZBTB44Q8NCP5 570 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 NFKBIZQ9BYH8 718 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 PIDD1Q9HB75 910 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 DDX25Q9UHL0 483 aaKnown RBP18.34■□□□□ 0.53
SNF8-205ENST00000507302 FBXW11Q9UKB1 542 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 ADAM28Q9UKQ2 775 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
SNF8-205ENST00000507302 KANSL1LA0AUZ9 987 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 LRRN2O75325 713 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 NR1I2O75469 434 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 POU2F2P09086 479 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 HNRNPA1P09651 372 aaKnown RBP eCLIP18.33■□□□□ 0.52
SNF8-205ENST00000507302 HOXA9P31269 272 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 HSPA4P34932 840 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 GPC5P78333 572 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 PRKCQQ04759 706 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 EMC2Q15006 297 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 PPP4R3AQ6IN85 833 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 PARM1Q6UWI2 310 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 RSPO2Q6UXX9 243 aaPredicted RBP18.33■□□□□ 0.52
SNF8-205ENST00000507302 B3GALT6Q96L58 329 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 XPNPEP1Q9NQW7 623 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 CDH7Q9ULB5 785 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 HES2Q9Y543 173 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 VWA8A3KMH1 1905 aa18.33■□□□□ 0.52
SNF8-205ENST00000507302 TBX3O15119 743 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 KINO60870 393 aaKnown RBP18.32■□□□□ 0.52
SNF8-205ENST00000507302 LILRB5O75023 590 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 MYBP10242 640 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 FSHRP23945 695 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 YWHABP31946 246 aaKnown RBP18.32■□□□□ 0.52
SNF8-205ENST00000507302 MAGEA9P43362 315 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 SPIRE1Q08AE8 756 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 MXD4Q14582 209 aaPredicted RBP18.32■□□□□ 0.52
SNF8-205ENST00000507302 EPHA7Q15375 998 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 HAS1Q92839 578 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
SNF8-205ENST00000507302 NCOA5Q9HCD5 579 aaKnown RBP18.32■□□□□ 0.52
SNF8-205ENST00000507302 PCDHGA2Q9Y5H1 932 aa18.32■□□□□ 0.52
SNF8-205ENST00000507302 SPTBN2O15020 2390 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 ERLIN2O94905 339 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 ARF4P18085 180 aaPredicted RBP18.31■□□□□ 0.52
SNF8-205ENST00000507302 GRIK3Q13003 919 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 RSPO4Q2I0M5 234 aaPredicted RBP18.31■□□□□ 0.52
SNF8-205ENST00000507302 RTP2Q5QGT7 225 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 VARS2Q5ST30 1063 aaKnown RBP18.31■□□□□ 0.52
SNF8-205ENST00000507302 MTSS1LQ765P7 747 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 GPR161Q8N6U8 529 aaKnown RBP18.31■□□□□ 0.52
SNF8-205ENST00000507302 PIK3R5Q8WYR1 880 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 CLDN23Q96B33 292 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 CLSTN3Q9BQT9 956 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 LXNQ9BS40 222 aa18.31■□□□□ 0.52
SNF8-205ENST00000507302 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
SNF8-205ENST00000507302 DEXIO95424 95 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 RPL17P18621 184 aaKnown RBP18.3■□□□□ 0.52
SNF8-205ENST00000507302 SDHBP21912 280 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 TGM1P22735 817 aa18.3■□□□□ 0.52
SNF8-205ENST00000507302 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
SNF8-205ENST00000507302 MLF2Q15773 248 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms