RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 KANSL1LA0AUZ9 987 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 MEIS2O14770 477 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 B4GALT3O60512 393 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 CELA2BP08218 269 aaPredicted RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 CNPP09543 421 aaKnown RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 TDGF1P13385 188 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 NT5C2P49902 561 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 BMS1Q14692 1282 aaKnown RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 NR6A1Q15406 480 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 MCMDC2Q4G0Z9 681 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 N4BP2L1Q5TBK1 243 aaPredicted RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 TSSK4Q6SA08 328 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 PLPPR4Q7Z2D5 763 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 ST13P5Q8NFI4 369 aaPredicted RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 ADAM32Q8TC27 787 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 ZNF707Q96C28 371 aaPredicted RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 CDHR1Q96JP9 859 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 JPH1Q9HDC5 661 aaPredicted RBP7.98□□□□□ -1.13
VCAN-206ENST00000505615 MAN1C1Q9NR34 630 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 TMPRSS4Q9NRS4 437 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 ZSWIM5Q9P217 1185 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 ACACAQ13085 2346 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 COL4A2P08572 1712 aa7.98□□□□□ -1.13
VCAN-206ENST00000505615 ASXL3Q9C0F0 2248 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 BPTFQ12830 3046 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 PNMA6FA0A0J9YX94 578 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 INPPL1O15357 1258 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 LRP3O75074 770 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 ZC3H11AO75152 810 aaKnown RBP eCLIP7.97□□□□□ -1.13
VCAN-206ENST00000505615 C22orf31O95567 290 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 VTNP04004 478 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 GALTP07902 379 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 LAMP2P13473 410 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 MX1P20591 662 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 ALDH7A1P49419 539 aaKnown RBP7.97□□□□□ -1.13
VCAN-206ENST00000505615 STAT5BP51692 787 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 ACTR2P61160 394 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 GPC5P78333 572 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 TRAF1Q13077 416 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 NMIQ13287 307 aaPredicted RBP7.97□□□□□ -1.13
VCAN-206ENST00000505615 GRM4Q14833 912 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 PRR23CQ6ZRP0 262 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 TMEM87AQ8NBN3 555 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 RNF169Q8NCN4 708 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 STAMQ92783 540 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 CLDN23Q96B33 292 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 RPP25Q9BUL9 199 aaKnown RBP7.97□□□□□ -1.13
VCAN-206ENST00000505615 MRPL9Q9BYD2 267 aaKnown RBP7.97□□□□□ -1.13
VCAN-206ENST00000505615 OSBPL6Q9BZF3 934 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 AZI2Q9H6S1 392 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 NRDE2Q9H7Z3 1164 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 LTB4R2Q9NPC1 389 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 SLC9A2Q9UBY0 812 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 ZMIZ1Q9ULJ6 1067 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 NUMBLQ9Y6R0 609 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 LAMA5O15230 3695 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 COL1A2P08123 1366 aa7.97□□□□□ -1.13
VCAN-206ENST00000505615 PCNX2A6NKB5 2137 aa7.96□□□□□ -1.13
VCAN-206ENST00000505615 IGKV6D-21A0A0A0MT36 114 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 A0A0U1RQF3 1178 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 CCDC195A0A1B0GUA6 201 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 ESPNB1AK53 854 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 TM4SF5O14894 197 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 HBP1O60381 514 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 RFPL2O75678 378 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 ATG7O95352 703 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 ITGB2P05107 769 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 RETP07949 1114 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 TARSP26639 723 aaKnown RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 KLRC2P26717 231 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 MAGEA9P43362 315 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 SLC11A1P49279 550 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 PTK2Q05397 1052 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 FZD5Q13467 585 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 SNW1Q13573 536 aaKnown RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 MTMR1Q13613 665 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 UBXN2BQ14CS0 331 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 MLF2Q15773 248 aaPredicted RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 LPAL2Q16609 132 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 IFIT1BQ5T764 474 aaKnown RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 LAIR1Q6GTX8 287 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 CYP26C1Q6V0L0 522 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 LINC01465Q8N7H1 131 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 SMARCC2Q8TAQ2 1214 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 FGF14Q92915 247 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 MAP4K1Q92918 833 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 TNPO1Q92973 898 aaKnown RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 EVI5LQ96CN4 794 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 SHDQ96IW2 340 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 ADAMTS10Q9H324 1103 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 JADE2Q9NQC1 790 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 SEMA4GQ9NTN9 838 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 DNAJB4Q9UDY4 337 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 ASCC3Q8N3C0 2202 aaKnown RBP7.96□□□□□ -1.14
VCAN-206ENST00000505615 NFASCO94856 1347 aa7.96□□□□□ -1.14
VCAN-206ENST00000505615 TDRD15B5MCY1 1934 aaKnown RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 FREM2Q5SZK8 3169 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms