RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 KIAA1586Q9HCI6 787 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 PTPRHQ9HD43 1115 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 CTNND2Q9UQB3 1225 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 MAPK8IP1Q9UQF2 711 aa11.22□□□□□ -0.61
RFC1-210ENST00000505077 COL4A6Q14031 1691 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 A0A0B4J269 797 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 ABLIM1O14639 778 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 IKBKBO14920 756 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 MAPK13O15264 365 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 SLC16A3O15427 465 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 NR3C1P04150 777 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 EDN1P05305 212 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 ACTN1P12814 892 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 CCL23P55773 120 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 FKBP3Q00688 224 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 MYL5Q02045 173 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 DSC3Q14574 896 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 TWF2Q6IBS0 349 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 KLHL10Q6JEL2 608 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 TTI2Q6NXR4 508 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 ARMCX5Q6P1M9 558 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 SLC39A4Q6P5W5 647 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 PSRC1Q6PGN9 363 aaPredicted RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 ZC3H3Q8IXZ2 948 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 FAM200AQ8TCP9 573 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 DPF3Q92784 378 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 SCLYQ96I15 445 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 CEP63Q96MT8 703 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 TCHPQ9BT92 498 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 TRIM6Q9C030 488 aaPredicted RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 GZF1Q9H116 711 aaPredicted RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 DNAJC25Q9H1X3 360 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
RFC1-210ENST00000505077 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 TSPY26PQ9H489 355 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 IL23AQ9NPF7 189 aa11.21□□□□□ -0.61
RFC1-210ENST00000505077 ABHD14A-ACY1A0A1B0GW23 586 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 CETN3O15182 167 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 OGTO15294 1046 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 ZNF623O75123 536 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 GNA14O95837 355 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 CSF2RAP15509 400 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 FGFR4P22455 802 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 NR2F2P24468 414 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 ITGB8P26012 769 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 MATR3P43243 847 aaKnown RBP eCLIP11.2□□□□□ -0.62
RFC1-210ENST00000505077 RGS19P49795 217 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 ZNF165P49910 485 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 ENPEPQ07075 957 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 IKBKEQ14164 716 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 GPNMBQ14956 572 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 C11orf57Q6ZUT1 292 aaPredicted RBP11.2□□□□□ -0.62
RFC1-210ENST00000505077 SLC24A5Q71RS6 500 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 USP37Q86T82 979 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 FAM114A1Q8IWE2 563 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 GPD1LQ8N335 351 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 CSGALNACT2Q8N6G5 542 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 XXYLT1Q8NBI6 393 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 ENOX1Q8TC92 643 aaKnown RBP11.2□□□□□ -0.62
RFC1-210ENST00000505077 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 CDT1Q9H211 546 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 HSPBP1Q9NZL4 362 aa11.2□□□□□ -0.62
RFC1-210ENST00000505077 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
RFC1-210ENST00000505077 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
RFC1-210ENST00000505077 A0A0U1RQF3 1178 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 SMTNL1A8MU46 457 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 ANKRD63C9JTQ0 380 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 EXTL3O43909 919 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 FAM189A1O60320 539 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 CLTAP09496 248 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 ADSSP30520 456 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 TPD52L1Q16890 204 aaPredicted RBP11.19□□□□□ -0.62
RFC1-210ENST00000505077 SPATA1Q5VX52 437 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 ANKRD40Q6AI12 368 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 LRRC55Q6ZSA7 311 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 DBF4BQ8NFT6 615 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 TSPAN18Q96SJ8 248 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 ADAM2Q99965 735 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
RFC1-210ENST00000505077 MTIF3Q9H2K0 278 aaKnown RBP11.19□□□□□ -0.62
RFC1-210ENST00000505077 UBN1Q9NPG3 1134 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 TOPORSQ9NS56 1045 aaPredicted RBP11.19□□□□□ -0.62
RFC1-210ENST00000505077 FAM105AQ9NUU6 356 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 DMAC2Q9NW81 257 aa11.19□□□□□ -0.62
RFC1-210ENST00000505077 FRMD4BQ9Y2L6 1034 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms