RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 SYNGAP1Q96PV0 1343 aa6.33□□□□□ -1.4
SNX25-203ENST00000504959 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 DEAF1O75398 565 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 CST3P01034 146 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 PYGMP11217 842 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 TNNT1P13805 278 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 SFPQP23246 707 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNX25-203ENST00000504959 CD68P34810 354 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 CBX1P83916 185 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 DDR1Q08345 913 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 CYP4F3Q08477 520 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 DMTNQ08495 405 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 SYCP1Q15431 976 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ABCB5Q2M3G0 1257 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 EXOSC6Q5RKV6 272 aaKnown RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 ZCCHC8Q6NZY4 707 aaKnown RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ILDR2Q71H61 639 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 HEATR3Q7Z4Q2 680 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 FOXP4Q8IVH2 680 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 SP8Q8IXZ3 490 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 GRAMD1CQ8IYS0 662 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 NXPE1Q8N323 547 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 SLC44A5Q8NCS7 719 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ANKS1AQ92625 1134 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ISL2Q96A47 359 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 SHISA4Q96DD7 197 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 EPSTI1Q96J88 318 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 TMEM47Q9BQJ4 181 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 NOL6Q9H6R4 1146 aaKnown RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 MAD2L2Q9UI95 211 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 AP4E1Q9UPM8 1137 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 PAXBP1Q9Y5B6 917 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 MORC2Q9Y6X9 1032 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 FLT1P17948 1338 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 MYH4Q9Y623 1939 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 E2F8A0AVK6 867 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 F8W031 263 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 PRKD3O94806 890 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 PARP1P09874 1014 aaKnown RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 ITGA4P13612 1032 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ATP1A3P13637 1013 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ALDH1B1P30837 517 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 CAP2P40123 477 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 KCNJ6P48051 423 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 MAP4K2Q12851 820 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 PICALMQ13492 652 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 MORC3Q14149 939 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 PPP2R5DQ14738 602 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 TXNRD1Q16881 649 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 NT5DC1Q5TFE4 455 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 DENND5AQ6IQ26 1287 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 GALNT17Q6IS24 598 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 C1orf229Q6ZS94 237 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 USP49Q70CQ1 688 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 IQUBQ8NA54 791 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 OR2W6PQ8NHA6 318 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 RASSF8Q8NHQ8 419 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 WHAMMQ8TF30 809 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 CCDC12Q8WUD4 166 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 WNK4Q96J92 1243 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 COA1Q9GZY4 146 aa6.32□□□□□ -1.4
SNX25-203ENST00000504959 OSBPL5Q9H0X9 879 aaPredicted RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 SEC63Q9UGP8 760 aaKnown RBP6.32□□□□□ -1.4
SNX25-203ENST00000504959 KLRF2D3W0D1 207 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 RNF225M0QZC1 329 aaPredicted RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 GOLGA8HP0CJ92 632 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 TOP1P11387 765 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 EPXP11678 715 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 FLT3P36888 993 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 ADCYAP1R1P41586 468 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 MAP2K3P46734 347 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 NCBP1Q09161 790 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 PTPN14Q15678 1187 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 NPY5RQ15761 445 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 PTPN21Q16825 1174 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 HSP90AA4PQ58FG1 418 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 SLC35F1Q5T1Q4 408 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 ARL6IP4Q66PJ3 421 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 DPP8Q6V1X1 898 aaPredicted RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 SLCO4C1Q6ZQN7 724 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 USP53Q70EK8 1073 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 TPH2Q8IWU9 490 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 DMRTC2Q8IXT2 367 aaPredicted RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 CBARPQ8N350 705 aaPredicted RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 TMEM151AQ8N4L1 468 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 RRP36Q96EU6 259 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 PAGE5Q96GU1 130 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 GTPBP4Q9BZE4 634 aaKnown RBP6.31□□□□□ -1.4
SNX25-203ENST00000504959 NKX2-4Q9H2Z4 354 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNX25-203ENST00000504959 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
SNX25-203ENST00000504959 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms