RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 MTF2Q9Y483 593 aaPredicted RBP13.03□□□□□ -0.32
CDK9-205ENST00000498339 HES2Q9Y543 173 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 SPTBN2O15020 2390 aa13.03□□□□□ -0.32
CDK9-205ENST00000498339 EPG5Q9HCE0 2579 aa13.02□□□□□ -0.32
CDK9-205ENST00000498339 STBD1O95210 358 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 TDP2O95551 362 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.33
CDK9-205ENST00000498339 MAGEA9P43362 315 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 USP11P51784 963 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 RCAN1P53805 252 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 NPEPPSP55786 919 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 NLRP5P59047 1200 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 EXOSC10Q01780 885 aaKnown RBP13.02□□□□□ -0.33
CDK9-205ENST00000498339 PFKPQ01813 784 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
CDK9-205ENST00000498339 LAMTOR4Q0VGL1 99 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 SLC44A4Q53GD3 710 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 NOTUMQ6P988 496 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 TSSK4Q6SA08 328 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 TPRG1Q6ZUI0 275 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 ANO5Q75V66 913 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 RNF149Q8NC42 400 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 SMG8Q8ND04 991 aaKnown RBP13.02□□□□□ -0.33
CDK9-205ENST00000498339 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
CDK9-205ENST00000498339 RABGGTAQ92696 567 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 CPB2Q96IY4 423 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 CEP170P1Q96L14 293 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 SLC26A6Q9BXS9 759 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
CDK9-205ENST00000498339 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 EPC1Q9H2F5 836 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 LTB4R2Q9NPC1 389 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 FNIP2Q9P278 1114 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
CDK9-205ENST00000498339 NCAM2O15394 837 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 CCL16O15467 120 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 PRPF3O43395 683 aaKnown RBP13.01□□□□□ -0.33
CDK9-205ENST00000498339 DSC1Q08554 894 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 KRT32Q14532 448 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 ADCK5Q3MIX3 580 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 PRSS55Q6UWB4 352 aaPredicted RBP13.01□□□□□ -0.33
CDK9-205ENST00000498339 EXOC8Q8IYI6 725 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 TCP11Q8WWU5 503 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 FGF13Q92913 245 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 SF3B1O75533 1304 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDK9-205ENST00000498339 CFAP47Q6ZTR5 3102 aa13.01□□□□□ -0.33
CDK9-205ENST00000498339 ACACBO00763 2458 aa13□□□□□ -0.33
CDK9-205ENST00000498339 GPR179Q6PRD1 2367 aa13□□□□□ -0.33
CDK9-205ENST00000498339 VWA8A3KMH1 1905 aa13□□□□□ -0.33
CDK9-205ENST00000498339 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
CDK9-205ENST00000498339 TSPAN1O60635 241 aa13□□□□□ -0.33
CDK9-205ENST00000498339 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
CDK9-205ENST00000498339 XYLBO75191 536 aa13□□□□□ -0.33
CDK9-205ENST00000498339 TADA2AO75478 443 aa13□□□□□ -0.33
CDK9-205ENST00000498339 C8AP07357 584 aa13□□□□□ -0.33
CDK9-205ENST00000498339 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
CDK9-205ENST00000498339 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
CDK9-205ENST00000498339 EMC2Q15006 297 aa13□□□□□ -0.33
CDK9-205ENST00000498339 LPAL2Q16609 132 aa13□□□□□ -0.33
CDK9-205ENST00000498339 Q4G0T1 1027 aa13□□□□□ -0.33
CDK9-205ENST00000498339 RSPO2Q6UXX9 243 aaPredicted RBP13□□□□□ -0.33
CDK9-205ENST00000498339 CEP57Q86XR8 500 aa13□□□□□ -0.33
CDK9-205ENST00000498339 BRF1Q92994 677 aa13□□□□□ -0.33
CDK9-205ENST00000498339 CCDC51Q96ER9 411 aa13□□□□□ -0.33
CDK9-205ENST00000498339 DDX23Q9BUQ8 820 aaKnown RBP13□□□□□ -0.33
CDK9-205ENST00000498339 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
CDK9-205ENST00000498339 OSBPL6Q9BZF3 934 aa13□□□□□ -0.33
CDK9-205ENST00000498339 RNF39Q9H2S5 420 aa13□□□□□ -0.33
CDK9-205ENST00000498339 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
CDK9-205ENST00000498339 MIOSQ9NXC5 875 aa13□□□□□ -0.33
CDK9-205ENST00000498339 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
CDK9-205ENST00000498339 FBXW11Q9UKB1 542 aa13□□□□□ -0.33
CDK9-205ENST00000498339 MAP1BP46821 2468 aaKnown RBP13□□□□□ -0.33
CDK9-205ENST00000498339 TICRRQ7Z2Z1 1910 aa13□□□□□ -0.33
CDK9-205ENST00000498339 TBC1D4O60343 1298 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 EFEMP2O95967 443 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 C1RP00736 705 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 ADRB1P08588 477 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDK9-205ENST00000498339 CPA1P15085 419 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 AKAP5P24588 427 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 TARSP26639 723 aaKnown RBP12.99□□□□□ -0.33
CDK9-205ENST00000498339 AXLP30530 894 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 RFC5P40937 340 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 GRIK3Q13003 919 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 PPM1JQ5JR12 505 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 LILRA6Q6PI73 481 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 PRR23BQ6ZRT6 265 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 Q6ZUG5 572 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 FERMT3Q86UX7 667 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
CDK9-205ENST00000498339 ZBTB44Q8NCP5 570 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 ITFG1Q8TB96 612 aa12.99□□□□□ -0.33
CDK9-205ENST00000498339 ING5Q8WYH8 240 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms