RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NLRP9Q7RTR0 991 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 ROPN1BQ9BZX4 212 aaPredicted RBP13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 ZWILCHQ9H900 591 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 ROPN1Q9HAT0 212 aaPredicted RBP13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 USP20Q9Y2K6 914 aa13.96□□□□□ -0.17
GAPVD1-220ENST00000497580 MARF1Q9Y4F3 1742 aaKnown RBP13.96□□□□□ -0.18
GAPVD1-220ENST00000497580 ZSCAN9O15535 394 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 RTP1P59025 263 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 TMEM62Q0P6H9 643 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 IZUMO2Q6UXV1 221 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 NSMFQ6X4W1 530 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 ENDOVQ8N8Q3 282 aaKnown RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 DNAJC1Q96KC8 554 aaKnown RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 TUBGCP5Q96RT8 1024 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 PIGSQ96S52 555 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 SMC6Q96SB8 1091 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 MIPEPQ99797 713 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 CRNKL1Q9BZJ0 848 aaKnown RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 MAD2L2Q9UI95 211 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 COG5Q9UP83 839 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 A6NJR5 290 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 POTECB2RU33 542 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 LMNAP02545 664 aaKnown RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 VCAM1P19320 739 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 PTPN4P29074 926 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 ADCY8P40145 1251 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 TMED1Q13445 227 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 DRAP1Q14919 205 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 IKZF4Q9H2S9 585 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 ATXN10Q9UBB4 475 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 SYNGAP1Q96PV0 1343 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 FAM47DPA6NHR8 397 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 MEIS1O00470 390 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 PYGMP11217 842 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 CETN2P41208 172 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 KBTBD2Q8IY47 623 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 INPP5DQ92835 1189 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 GRAMD1AQ96CP6 724 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 DNAJC19Q96DA6 116 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 CADM1Q9BY67 442 aaKnown RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 SUDS3Q9H7L9 328 aaPredicted RBP13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 PDP2Q9P2J9 529 aa13.95□□□□□ -0.18
GAPVD1-220ENST00000497580 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 TXNDC9O14530 226 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 EXOC3O60645 756 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 LYNP07948 512 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 KLRK1P26718 216 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 P3H1Q32P28 736 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 TRMT10CQ7L0Y3 403 aaKnown RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 WDR60Q8WVS4 1066 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 LRRC27Q9C0I9 530 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 CLDN3O15551 220 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 COMTP21964 271 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 SERPINB3P29508 390 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 PRDX5P30044 214 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 UBE2SQ16763 222 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 RNF207Q6ZRF8 634 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 RDH13Q8NBN7 331 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 CFAP61Q8NHU2 1237 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 IL17RBQ9NRM6 502 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 DNAJC12Q9UKB3 198 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 AKAP3O75969 853 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 PSMG1O95456 288 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 CYP1A1P04798 512 aaPredicted RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 DESP17661 470 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 ITGA8P53708 1063 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 TRIM28Q13263 835 aaKnown RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 DHX36Q9H2U1 1008 aaKnown RBP13.94□□□□□ -0.18
GAPVD1-220ENST00000497580 PIAS1O75925 651 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 IMPDH2P12268 514 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 LMNB1P20700 586 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 YARSP54577 528 aaKnown RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 SGO2Q562F6 1265 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 IFT43Q96FT9 208 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 ZNF184Q99676 751 aaPredicted RBP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 CCDC77Q9BR77 488 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 CENPKQ9BS16 269 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 TMEM109Q9BVC6 243 aa13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
GAPVD1-220ENST00000497580 FRMPD2Q68DX3 1309 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms